Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   MF598_RS18195 Genome accession   NZ_CP092185
Coordinates   3645915..3646868 (-) Length   317 a.a.
NCBI ID   WP_032872883.1    Uniprot ID   -
Organism   Bacillus velezensis strain K203     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3640915..3651868
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  MF598_RS18175 (MF598_18175) - 3641797..3643218 (+) 1422 WP_239033884.1 MDR family MFS transporter -
  MF598_RS18180 (MF598_18180) - 3643260..3644204 (-) 945 WP_007609406.1 siderophore ABC transporter substrate-binding protein -
  MF598_RS18185 (MF598_18185) - 3644226..3644984 (-) 759 WP_003156330.1 ABC transporter ATP-binding protein -
  MF598_RS18190 (MF598_18190) - 3644978..3645925 (-) 948 WP_014416905.1 iron chelate uptake ABC transporter family permease subunit -
  MF598_RS18195 (MF598_18195) ceuB 3645915..3646868 (-) 954 WP_032872883.1 ABC transporter permease Machinery gene
  MF598_RS18200 (MF598_18200) - 3647282..3648646 (+) 1365 WP_007609394.1 aspartate kinase -
  MF598_RS18205 (MF598_18205) - 3648741..3648842 (+) 102 WP_239033885.1 YjcZ family sporulation protein -
  MF598_RS18210 (MF598_18210) phrC 3648991..3649110 (-) 120 WP_003156334.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  MF598_RS18215 (MF598_18215) rapC 3649094..3650242 (-) 1149 WP_029326229.1 Rap family tetratricopeptide repeat protein Regulator
  MF598_RS18220 (MF598_18220) - 3650401..3651828 (-) 1428 WP_224224030.1 HAMP domain-containing sensor histidine kinase -

Sequence

Protein


Download         Length: 317 a.a.        Molecular weight: 34931.21 Da        Isoelectric Point: 9.6741

>NTDB_id=656281 MF598_RS18195 WP_032872883.1 3645915..3646868(-) (ceuB) [Bacillus velezensis strain K203]
MKLRYLLLLLAVLACTSIFIGVEDLSPLDIFHLNKEQAGTLFDSRLPRLVSIIIAGMSLSICGLIMQQISRNKFVSPTTA
GTMDWARLGILISLMLFTSASPLVKMSIAFVFALAGNFLFMKILERIKFNDAIFIPLVGLMLGNIVSSVATFIAYKYDLI
QNLSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLIASLVILTVGM
LPFLGLIIPNMVSIYKGDNLRSSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGVIGSGIFLYMLLRRKAYES

Nucleotide


Download         Length: 954 bp        

>NTDB_id=656281 MF598_RS18195 WP_032872883.1 3645915..3646868(-) (ceuB) [Bacillus velezensis strain K203]
ATGAAGCTACGTTACTTACTTTTGCTACTGGCGGTTTTGGCGTGTACTTCTATATTTATCGGTGTAGAAGATTTGTCGCC
GCTGGATATTTTTCATTTAAATAAAGAACAGGCAGGTACATTGTTTGACAGCCGGCTGCCGCGTTTGGTGAGCATTATCA
TCGCCGGCATGAGCCTGAGCATCTGCGGATTAATCATGCAGCAGATCAGCCGGAATAAATTTGTATCGCCGACGACTGCG
GGAACGATGGACTGGGCAAGGCTCGGAATTTTGATTTCATTAATGCTTTTTACGTCAGCCAGTCCGCTTGTGAAAATGTC
TATCGCTTTCGTTTTCGCGTTGGCGGGAAATTTCCTGTTCATGAAAATCCTCGAGAGAATCAAGTTTAATGATGCGATTT
TTATTCCTCTCGTCGGTTTAATGCTTGGGAATATCGTCAGTTCAGTCGCCACGTTTATCGCATATAAATACGACCTGATC
CAAAACCTGTCGTCCTGGCTGCAGGGGGATTTCTCACTGGTCGTCAAAGGCCGGTATGAGCTTTTATATCTGAGTATCCC
GCTGGTGATCATCGCTTATGTGTATGCGGATAAATTTACGGTGGCGGGAATGGGAGAGAGCTTTTCCGTCAATCTCGGCC
TGAAATACAAACGCGTCGTCAATATCGGTCTGATTATCGTGTCGCTCATCGCTTCACTGGTGATCCTGACCGTCGGGATG
CTGCCGTTTCTCGGTTTGATCATTCCCAATATGGTGTCGATTTACAAAGGGGACAACCTGAGGAGCAGCCTGCCTCACAC
CGCTCTGCTGGGCGCTGTTTTTGTGCTGTTTTGCGACATTTTGGGAAGGGTGATCATCTTCCCGTACGAAATTTCCATCG
GCCTGATGGTCGGTGTTATCGGCAGCGGCATCTTCCTGTATATGCTGTTAAGGAGAAAAGCATATGAGTCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.481

99.685

0.533