Detailed information    

insolico Bioinformatically predicted

Overview

Name   comP   Type   Regulator
Locus tag   LGL65_RS15500 Genome accession   NZ_CP092110
Coordinates   3020354..3022660 (+) Length   768 a.a.
NCBI ID   WP_017419423.1    Uniprot ID   -
Organism   Bacillus velezensis strain LOH112     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context

Location: 3015354..3027660
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LGL65_RS15475 - 3016941..3018164 (+) 1224 WP_014418766.1 EAL and HDOD domain-containing protein -
  LGL65_RS15480 - 3018171..3018512 (-) 342 WP_014418765.1 hypothetical protein -
  LGL65_RS15485 degQ 3018977..3019117 (+) 141 WP_003152043.1 degradation enzyme regulation protein DegQ Regulator
  LGL65_RS15490 - 3019248..3020144 (+) 897 WP_017419425.1 polyprenyl synthetase family protein -
  LGL65_RS15495 comX 3020159..3020335 (+) 177 WP_017419424.1 competence pheromone ComX -
  LGL65_RS15500 comP 3020354..3022660 (+) 2307 WP_017419423.1 sensor histidine kinase Regulator
  LGL65_RS15505 comA 3022741..3023385 (+) 645 WP_014418762.1 response regulator transcription factor Regulator
  LGL65_RS15510 - 3023407..3023790 (+) 384 WP_017419422.1 hotdog fold thioesterase -
  LGL65_RS15515 mnhG 3023830..3024204 (-) 375 WP_017419421.1 monovalent cation/H(+) antiporter subunit G -
  LGL65_RS15520 - 3024188..3024472 (-) 285 WP_017419420.1 Na(+)/H(+) antiporter subunit F1 -
  LGL65_RS15525 - 3024472..3024948 (-) 477 WP_017419419.1 Na+/H+ antiporter subunit E -
  LGL65_RS15530 - 3024954..3026435 (-) 1482 WP_017419418.1 Na+/H+ antiporter subunit D -
  LGL65_RS15535 - 3026428..3026769 (-) 342 WP_003152063.1 Na(+)/H(+) antiporter subunit C -
  LGL65_RS15540 - 3026769..3027200 (-) 432 WP_007613424.1 Na(+)/H(+) antiporter subunit B -

Sequence

Protein


Download         Length: 768 a.a.        Molecular weight: 89341.65 Da        Isoelectric Point: 8.3541

>NTDB_id=655976 LGL65_RS15500 WP_017419423.1 3020354..3022660(+) (comP) [Bacillus velezensis strain LOH112]
MKKFIRNFSIVLLFVSLFYVVHIIYFTQNGVLVGTYVVENNNHELQVVKLSKSTYGKYMGLKEGDRIIEISGKTPTEENI
RGQYLAKAEHMKIIRGNSKIDLHNTEFISLNSSYSFFIYIIPCILFALSMLCIFYIYKVNRVKDTYSAYILIIFLLCTSI
AYLSAGGVTRGYEINRYINLFTFLNVPVLYFHFLYQYFKELKLKFSAGYVVSTLYILPVINIIIEIFQKHFAFQLVTNIN
LVTFFLEMMVVYTSIIFYGLVYRKKDHFYLLKVLLISNTIAFFPFTVFYIIPEVLFGQYIYSAIVTAPFLIIIPLALVYQ
FVVNKIYDIDFLLGRIRYYGFLSIIPTIGVVWLNILFDSKGNNFNIIQITVYVFLIFLAVFYIKELLDYKFRLKRFSEKY
NYQDSIYKYTQLLKSVSALNQVFMNLKKTILDVLPVSKAYIFEINSDGDILYFDKQNSEPNWLPYKKEFVKVTSEIGKIF
EVNQGFLMKIGERGANSYVLLCLSSINTPRLTRDEISWLKTLSFYTSVSMENILQIEELMNHLQDLKQQGSNPVWLKKLM
FTIEEKQRSDLARDLHDSVLQDLISLKRQCELFLADFKKEEPCHIEVQDKLHQMNEQMSDVILMTRETCHELRPQLLYDL
GLVKAVSKLAAQQQERAPFHIRLNTGRFTAALDLDTQLNLYRIIQEFLSNAMKHSQANEVLIMLISIQNKVILHYEDDGV
GCNQEEGGGQSMSMGLSGIKERVRALDGRMKIDTSEGNGFKADIEMEL

Nucleotide


Download         Length: 2307 bp        

>NTDB_id=655976 LGL65_RS15500 WP_017419423.1 3020354..3022660(+) (comP) [Bacillus velezensis strain LOH112]
TTGAAAAAATTCATTAGAAATTTTTCGATTGTATTGTTATTCGTCAGTCTCTTTTACGTCGTTCATATTATATATTTTAC
TCAAAACGGAGTTTTGGTAGGAACCTATGTGGTTGAAAACAATAACCATGAATTGCAGGTTGTAAAACTCTCCAAGTCTA
CGTATGGTAAATATATGGGCTTAAAAGAGGGAGACAGGATAATTGAAATAAGCGGAAAAACACCGACAGAAGAGAATATA
AGAGGTCAATATCTAGCGAAAGCTGAACATATGAAAATAATAAGGGGTAATAGTAAAATAGACTTACATAATACTGAGTT
TATTTCCTTAAATAGCTCTTATAGTTTTTTTATCTATATTATCCCATGCATATTATTTGCTTTAAGCATGTTATGCATTT
TTTATATTTATAAAGTTAACAGAGTAAAAGATACTTATTCAGCCTATATTTTGATTATTTTTTTATTGTGTACATCCATT
GCATATTTAAGCGCAGGTGGAGTAACTAGAGGATATGAAATAAACAGATATATTAACCTTTTTACATTTTTGAACGTACC
TGTATTATACTTTCACTTTTTGTATCAATACTTTAAAGAATTAAAATTGAAATTTTCAGCTGGTTATGTTGTGTCTACTC
TCTATATATTGCCGGTTATTAATATAATAATCGAGATATTCCAGAAGCATTTTGCCTTCCAACTTGTTACGAATATTAAT
TTAGTAACATTTTTTTTGGAAATGATGGTCGTCTATACATCCATTATTTTTTATGGACTAGTCTACCGAAAAAAGGATCA
CTTTTATTTGCTGAAAGTGTTACTTATATCTAATACCATAGCCTTTTTTCCGTTTACAGTATTTTATATTATACCTGAGG
TGTTGTTCGGACAGTATATTTATTCTGCTATAGTTACGGCACCATTTTTAATAATTATTCCATTAGCTTTAGTCTATCAA
TTCGTGGTCAATAAAATCTACGATATAGACTTCTTGTTGGGCAGAATCAGGTACTATGGTTTCCTTTCCATTATTCCGAC
TATTGGAGTTGTATGGCTGAATATATTATTCGACAGCAAGGGGAATAACTTTAACATTATTCAAATCACTGTATATGTAT
TTTTGATTTTTTTAGCGGTATTTTATATTAAGGAGTTATTAGACTACAAATTTCGCCTGAAACGTTTTTCAGAAAAATAT
AATTATCAAGACAGCATTTATAAATATACACAGCTTCTTAAAAGCGTATCAGCTTTAAATCAAGTGTTTATGAATTTGAA
AAAGACTATTTTGGACGTCTTGCCTGTTAGTAAAGCTTATATATTTGAAATCAATTCTGACGGAGACATTCTGTATTTTG
ATAAACAGAACAGTGAACCGAACTGGCTGCCGTATAAAAAAGAATTTGTTAAAGTCACATCAGAGATTGGCAAGATTTTT
GAAGTAAATCAAGGTTTTCTGATGAAGATTGGAGAAAGAGGGGCAAACTCATACGTTCTGCTTTGTTTGTCGAGCATTAA
TACTCCGAGACTGACAAGAGATGAGATATCTTGGTTAAAGACATTGTCTTTTTATACAAGTGTTTCGATGGAAAACATAT
TGCAGATCGAAGAACTCATGAACCATTTACAAGACCTGAAACAACAAGGCTCAAACCCGGTCTGGCTCAAAAAGCTGATG
TTTACGATCGAGGAAAAGCAGCGTTCGGATTTGGCCCGTGATCTGCATGATTCAGTGCTGCAGGACTTGATTTCTTTGAA
GCGCCAGTGTGAACTGTTTCTGGCCGATTTTAAGAAAGAGGAGCCCTGCCACATAGAGGTGCAGGACAAGCTTCATCAGA
TGAATGAGCAGATGTCGGATGTCATTTTGATGACCCGGGAGACGTGCCATGAGCTTCGTCCTCAGCTGCTGTATGATTTG
GGTCTGGTCAAGGCGGTATCCAAGCTTGCCGCGCAGCAGCAGGAGCGTGCGCCGTTTCATATCCGTCTGAATACGGGCCG
GTTTACGGCGGCGCTGGATTTGGATACGCAGCTGAATTTGTACCGCATCATTCAGGAATTTCTTTCGAACGCCATGAAGC
ATTCACAGGCGAATGAGGTGCTGATTATGCTGATCAGCATTCAAAATAAAGTGATTCTGCATTATGAAGACGACGGTGTC
GGATGCAATCAGGAAGAAGGCGGCGGGCAGTCGATGAGCATGGGTCTTTCGGGTATTAAGGAGCGTGTCCGGGCGCTTGA
CGGACGGATGAAAATCGACACAAGTGAAGGAAACGGTTTTAAAGCGGATATTGAAATGGAATTGTAA

Domains

Predicted by InterproScan.

Histidine kinase (HisKA_3)

(568-637)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

59.144

100

0.594