Detailed information NTG0655859

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG830_RS13635
• Genome accession: NZ_CP108194
• Coordinates: 3005272..3006570 (-)
• Length: 432 a.a.
• NCBI ID: WP_030970081.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00121
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3000272..3011570

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG830_RS13625 (OG830_13675)	-	3001431..3004052 (-)	2622	WP_313937266.1	valine--tRNA ligase	-
OG830_RS13630 (OG830_13680)	-	3004191..3005204 (+)	1014	WP_326744365.1	hypothetical protein	-
OG830_RS13635 (OG830_13685)	clpX	3005272..3006570 (-)	1299	WP_030970081.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG830_RS13640 (OG830_13690)	clpP	3006728..3007411 (-)	684	WP_030921266.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG830_RS13645 (OG830_13695)	-	3007459..3008064 (-)	606	WP_018551584.1	ATP-dependent Clp protease proteolytic subunit	-
OG830_RS13650 (OG830_13700)	tig	3008329..3009717 (-)	1389	WP_313937268.1	trigger factor	-
OG830_RS13665 (OG830_13715)	-	3010253..3010447 (-)	195	WP_030921275.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47284.11 Da
• Isoelectric Point: 4.8824

>NTDB_id=655859 OG830_RS13635 WP_030970081.1 3005272..3006570(-) (clpX) [Streptomyces sp. NBC_00121]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENAGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=655859 OG830_RS13635 WP_030970081.1 3005272..3006570(-) (clpX) [Streptomyces sp. NBC_00121]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
TGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGTCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCGGGCGAGAACGCCGGCGCGCAGGGCCG
GGACGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATTCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAGAACCCGTCGATCACCCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAGGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGTGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATTCCCGAGTTCATCGGCCGCCTCCCCGTGCTTACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTCGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGTGGTCTCC
GGGCCATCATGGAGGAAGTCCTGCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACG
GCGGACGTGGTCCGTAACAACGTCAACCCGACACTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGACG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.056	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509