Detailed information
Bioinformatically predicted
Overview
| Name | ssbA | Type | Machinery gene |
| Locus tag | OXB_RS04945 | Genome accession | NZ_AP013294 |
| Coordinates | 953850..954371 (-) | Length | 173 a.a. |
| NCBI ID | WP_041072380.1 | Uniprot ID | A0A0A8JFR8 |
| Organism | Bacillus sp. OxB-1 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 948850..959371
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OXB_RS04925 (OXB_0949) | rplI | 949990..950436 (-) | 447 | WP_041072372.1 | 50S ribosomal protein L9 | - |
| OXB_RS04930 (OXB_0950) | - | 950438..952408 (-) | 1971 | WP_041072374.1 | DHH family phosphoesterase | - |
| OXB_RS04935 (OXB_0951) | - | 952422..953360 (-) | 939 | WP_041072376.1 | DUF2232 domain-containing protein | - |
| OXB_RS04940 (OXB_0952) | rpsR | 953565..953801 (-) | 237 | WP_041072378.1 | 30S ribosomal protein S18 | - |
| OXB_RS04945 (OXB_0953) | ssbA | 953850..954371 (-) | 522 | WP_041072380.1 | single-stranded DNA-binding protein | Machinery gene |
| OXB_RS04950 (OXB_0954) | rpsF | 954419..954706 (-) | 288 | WP_041072381.1 | 30S ribosomal protein S6 | - |
| OXB_RS04955 (OXB_0955) | - | 954927..955502 (+) | 576 | WP_041072382.1 | DUF3267 domain-containing protein | - |
| OXB_RS04960 (OXB_0956) | ychF | 955734..956834 (-) | 1101 | WP_041072383.1 | redox-regulated ATPase YchF | - |
| OXB_RS04965 (OXB_0957) | - | 956926..957123 (-) | 198 | WP_041072384.1 | DUF951 domain-containing protein | - |
| OXB_RS04970 (OXB_0958) | - | 957142..958014 (-) | 873 | WP_231860364.1 | mechanosensitive ion channel family protein | - |
| OXB_RS04975 (OXB_0959) | yyaC | 958113..958667 (+) | 555 | WP_231860365.1 | spore protease YyaC | - |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 19276.10 Da Isoelectric Point: 4.9561
>NTDB_id=65579 OXB_RS04945 WP_041072380.1 953850..954371(-) (ssbA) [Bacillus sp. OxB-1]
MINRVVLVGRLTKDPELRYTQTGIAVVRFTLAVNRAFQNQSGEREADFINCVAWRKQAENIANFLRKGSLVGVDGRIQTG
SFEGQDGKRVYTTEVVADSTQFLEPRNASANTERTGSYQQGAPSYGGQPQNNQPYYQPNQPQHQPSQQNYTRTDDDPFSA
GGPIEVSDDDLPF
MINRVVLVGRLTKDPELRYTQTGIAVVRFTLAVNRAFQNQSGEREADFINCVAWRKQAENIANFLRKGSLVGVDGRIQTG
SFEGQDGKRVYTTEVVADSTQFLEPRNASANTERTGSYQQGAPSYGGQPQNNQPYYQPNQPQHQPSQQNYTRTDDDPFSA
GGPIEVSDDDLPF
Nucleotide
Download Length: 522 bp
>NTDB_id=65579 OXB_RS04945 WP_041072380.1 953850..954371(-) (ssbA) [Bacillus sp. OxB-1]
TTGATTAACCGAGTTGTTTTAGTAGGAAGGTTGACCAAAGATCCGGAACTCCGTTATACGCAGACAGGCATTGCCGTTGT
CCGCTTCACATTGGCGGTCAATCGGGCTTTCCAGAACCAGTCAGGTGAACGGGAAGCGGATTTCATCAATTGCGTTGCAT
GGCGGAAACAGGCCGAGAACATCGCGAACTTTTTAAGAAAAGGCAGTCTTGTCGGAGTGGATGGCCGTATTCAGACGGGC
AGCTTCGAAGGACAAGACGGCAAGCGCGTGTACACAACCGAGGTCGTCGCCGACAGTACGCAGTTCTTGGAACCGCGCAA
TGCCAGCGCGAACACGGAAAGAACCGGATCTTACCAACAAGGCGCACCGTCGTATGGCGGCCAGCCGCAGAACAACCAAC
CGTACTACCAGCCCAATCAACCACAACACCAACCGAGTCAGCAGAACTATACACGTACCGATGATGATCCGTTTTCGGCA
GGCGGTCCGATTGAAGTATCGGATGACGACCTGCCGTTCTAA
TTGATTAACCGAGTTGTTTTAGTAGGAAGGTTGACCAAAGATCCGGAACTCCGTTATACGCAGACAGGCATTGCCGTTGT
CCGCTTCACATTGGCGGTCAATCGGGCTTTCCAGAACCAGTCAGGTGAACGGGAAGCGGATTTCATCAATTGCGTTGCAT
GGCGGAAACAGGCCGAGAACATCGCGAACTTTTTAAGAAAAGGCAGTCTTGTCGGAGTGGATGGCCGTATTCAGACGGGC
AGCTTCGAAGGACAAGACGGCAAGCGCGTGTACACAACCGAGGTCGTCGCCGACAGTACGCAGTTCTTGGAACCGCGCAA
TGCCAGCGCGAACACGGAAAGAACCGGATCTTACCAACAAGGCGCACCGTCGTATGGCGGCCAGCCGCAGAACAACCAAC
CGTACTACCAGCCCAATCAACCACAACACCAACCGAGTCAGCAGAACTATACACGTACCGATGATGATCCGTTTTCGGCA
GGCGGTCCGATTGAAGTATCGGATGACGACCTGCCGTTCTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssbA | Bacillus subtilis subsp. subtilis str. 168 |
60.335 |
100 |
0.624 |
| ssb | Latilactobacillus sakei subsp. sakei 23K |
52.874 |
100 |
0.532 |
| ssbB | Bacillus subtilis subsp. subtilis str. 168 |
62.264 |
61.272 |
0.382 |