Detailed information NTG0655775

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG737_RS09260
• Genome accession: NZ_CP108191
• Coordinates: 1956429..1957715 (-)
• Length: 428 a.a.
• NCBI ID: WP_328925721.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00122
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1951429..1962715

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG737_RS09240 (OG737_09210)	-	1951492..1954113 (-)	2622	WP_328925717.1	valine--tRNA ligase	-
OG737_RS09245 (OG737_09215)	-	1954212..1954913 (+)	702	WP_405921398.1	hypothetical protein	-
OG737_RS09250 (OG737_09220)	-	1955020..1955931 (+)	912	WP_328925719.1	hypothetical protein	-
OG737_RS09255 (OG737_09225)	-	1955987..1956259 (-)	273	WP_328925720.1	hypothetical protein	-
OG737_RS09260 (OG737_09230)	clpX	1956429..1957715 (-)	1287	WP_328925721.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG737_RS09265 (OG737_09235)	clpP	1957869..1958540 (-)	672	WP_328925722.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG737_RS09270 (OG737_09240)	clpP	1958608..1959225 (-)	618	WP_328925723.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG737_RS09275 (OG737_09245)	tig	1959502..1960890 (-)	1389	WP_328925724.1	trigger factor	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46950.90 Da
• Isoelectric Point: 4.7729

>NTDB_id=655775 OG737_RS09260 WP_328925721.1 1956429..1957715(-) (clpX) [Streptomyces sp. NBC_00122]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFAATIRSKREIEASNQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
AEVVRSNVNPTLVPRIVPKDQGPQEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=655775 OG737_RS09260 WP_328925721.1 1956429..1957715(-) (clpX) [Streptomyces sp. NBC_00122]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCCGTCGCGGTCTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACCCTGCTGGCCCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACGACGGCCTCCGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGCGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCAACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACCTCCGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGTAACGCCCTGGTGAAGCAGTACCAGCGGTTGTTCGAACTCGACGGTGT
CGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
GCCGAGGTCGTCCGCTCCAACGTCAACCCGACGCTGGTCCCGCGGATCGTCCCGAAGGACCAGGGCCCGCAGGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521