Detailed information NTG0655732

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG427_RS25530
• Genome accession: NZ_CP108183
• Coordinates: 5628811..5630103 (+)
• Length: 430 a.a.
• NCBI ID: WP_360880935.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00133
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5623811..5635103

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG427_RS25500 (OG427_25455)	-	5624843..5625037 (+)	195	WP_313946321.1	hypothetical protein	-
OG427_RS25515 (OG427_25470)	tig	5625688..5627091 (+)	1404	WP_360880931.1	trigger factor	-
OG427_RS25520 (OG427_25475)	-	5627344..5627949 (+)	606	WP_360881024.1	ATP-dependent Clp protease proteolytic subunit	-
OG427_RS25525 (OG427_25480)	clpP	5627991..5628665 (+)	675	WP_360880933.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG427_RS25530 (OG427_25485)	clpX	5628811..5630103 (+)	1293	WP_360880935.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG427_RS25535 (OG427_25490)	-	5630168..5631106 (-)	939	WP_405890670.1	hypothetical protein	-
OG427_RS25540 (OG427_25495)	-	5631243..5633864 (+)	2622	WP_405890672.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47110.01 Da
• Isoelectric Point: 4.8809

>NTDB_id=655732 OG427_RS25530 WP_360880935.1 5628811..5630103(+) (clpX) [Streptomyces sp. NBC_00133]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=655732 OG427_RS25530 WP_360880935.1 5628811..5630103(+) (clpX) [Streptomyces sp. NBC_00133]
GTGGCACGCATTGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGTTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAATGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAACTGGCCAAGTCCAACATCCTGTTGCTCGGTCCCACCGGGTCCGGCAAGACGCTCCTTGCCCAGA
CGCTGGCCCGGATGCTCAATGTCCCGTTCGCCATTGCCGATGCGACGGCGCTGACGGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCCGTGCCCCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCGGTACTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTGGTGGAGCCCCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTGTTCGAACTGGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCGCTCGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGCGCGCGGGGCCTGC
GGGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCGCGCAAGGACGTCGCACGGGTGGTCATCACG
GCCGATGTGGTGCACAACAACGTGAACCCGACGCTGGTGCCGCGGGAGCCGCGGATCGTGAAGAACGACGGGCGTCACGA
GAAGTCGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.488	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512