Detailed information    

insolico Bioinformatically predicted

Overview


Name   sepM   Type   Regulator
Locus tag   ANG_RS08725 Genome accession   NZ_AP013072
Coordinates   1737608..1738663 (-) Length   351 a.a.
NCBI ID   WP_021001375.1    Uniprot ID   -
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   processing of CSP (predicted from homology)   
Competence regulation

Genomic Context


Location: 1732608..1743663
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS08710 (ANG_1772) - 1735268..1735798 (-) 531 WP_003035190.1 VanZ family protein -
  ANG_RS08715 (ANG_1773) rlmN 1735791..1736873 (-) 1083 WP_025271931.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  ANG_RS08720 (ANG_1774) - 1736907..1737470 (-) 564 WP_003035207.1 YutD family protein -
  ANG_RS08725 (ANG_1775) sepM 1737608..1738663 (-) 1056 WP_021001375.1 SepM family pheromone-processing serine protease Regulator
  ANG_RS08730 (ANG_1776) coaD 1738644..1739141 (-) 498 WP_003025749.1 pantetheine-phosphate adenylyltransferase -
  ANG_RS08735 (ANG_1777) rsmD 1739131..1739679 (-) 549 WP_025271932.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  ANG_RS08740 (ANG_1778) hpf 1739867..1740409 (-) 543 WP_003032381.1 ribosome hibernation-promoting factor, HPF/YfiA family -
  ANG_RS08745 (ANG_1779) comFC/cflB 1740487..1741152 (-) 666 WP_025271933.1 ComF family protein Machinery gene
  ANG_RS08750 (ANG_1780) comFA/cflA 1741149..1742450 (-) 1302 WP_025271934.1 DEAD/DEAH box helicase Machinery gene
  ANG_RS08755 (ANG_1781) - 1742507..1743142 (+) 636 WP_003032900.1 YigZ family protein -

Sequence


Protein


Download         Length: 351 a.a.        Molecular weight: 38338.29 Da        Isoelectric Point: 10.1906

>NTDB_id=65537 ANG_RS08725 WP_021001375.1 1737608..1738663(-) (sepM) [Streptococcus anginosus subsp. whileyi MAS624]
MEKPRNKFKKWPIIAVVGLILLFLSFVVPLPYYIEVPGGAADVRQVLRVDNKEDKEKGSYNFVTVGIQHATFAHLVYAWL
TPFTDIYSAKDLTGGTSDKEYMRINQFYMETSQNLAKYQGLKKAGKDITLKYLGVYVLQVTKNSTFKGILNIADTVTGVN
DKTFNSSKELIDYVGAQKIGSKVKVNYVEDGQKKSATGKIIKLENGKNGIGISLIDRTEVTSNTPIEFSTAGIGGPSAGL
MFSLAIYTQIADPTLRDGRNIAGTGSIDREGKVGDIGGIDKKVVSAAKNGAEIFFAPNNPVTKEVKKSNPKAKTNYETAL
AAAKKIKTKMKIVPVKTLQDAIDYLKSTKKS

Nucleotide


Download         Length: 1056 bp        

>NTDB_id=65537 ANG_RS08725 WP_021001375.1 1737608..1738663(-) (sepM) [Streptococcus anginosus subsp. whileyi MAS624]
ATGGAAAAACCAAGAAATAAATTTAAAAAATGGCCGATAATTGCAGTAGTAGGGCTGATTTTGCTTTTCTTATCTTTTGT
AGTTCCCTTGCCTTATTATATTGAGGTGCCAGGTGGTGCAGCGGATGTCCGTCAGGTATTGCGCGTGGACAACAAAGAAG
ATAAGGAAAAAGGTTCTTATAATTTTGTAACGGTTGGGATTCAGCATGCGACCTTCGCTCATTTGGTTTATGCTTGGCTG
ACTCCTTTTACAGATATTTATTCGGCGAAGGATTTGACTGGCGGAACTTCTGATAAAGAATACATGCGGATCAATCAGTT
TTATATGGAAACGTCGCAAAACCTAGCTAAATACCAAGGCTTGAAAAAAGCTGGCAAAGACATTACTCTGAAATATCTAG
GGGTTTACGTCTTGCAAGTCACAAAGAATTCTACTTTTAAAGGTATTTTAAATATTGCAGATACCGTGACAGGTGTGAAT
GATAAGACTTTCAATAGTTCAAAAGAATTGATAGACTATGTCGGAGCGCAAAAGATTGGCAGCAAGGTCAAGGTGAACTA
TGTAGAAGACGGTCAGAAGAAATCTGCTACAGGTAAAATTATTAAACTTGAAAATGGAAAAAACGGGATTGGCATTAGCT
TGATTGACCGAACAGAAGTCACAAGTAACACACCAATTGAATTTTCAACTGCCGGTATTGGTGGACCAAGTGCGGGCTTG
ATGTTTAGTTTGGCAATTTATACGCAAATTGCAGATCCAACATTGAGAGACGGCAGAAATATTGCTGGGACGGGCTCAAT
TGACCGCGAAGGAAAAGTTGGCGACATTGGTGGGATTGACAAAAAAGTTGTTTCAGCAGCTAAAAATGGCGCAGAAATTT
TCTTTGCGCCAAATAATCCAGTCACCAAGGAAGTGAAAAAATCCAATCCTAAAGCGAAAACAAACTATGAGACAGCTTTG
GCAGCTGCTAAAAAAATTAAAACTAAAATGAAAATTGTACCTGTCAAGACCTTGCAAGACGCAATTGATTACCTCAAGAG
CACAAAAAAGTCGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  sepM Streptococcus mutans UA159

64.516

97.151

0.627


Multiple sequence alignment