Detailed information NTG0655244

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG915_RS29425
• Genome accession: NZ_CP108165
• Coordinates: 6654248..6655534 (+)
• Length: 428 a.a.
• NCBI ID: WP_326787793.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00151
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6649248..6660534

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG915_RS29395 (OG915_29425)	-	6649598..6649981 (-)	384	WP_326791143.1	hypothetical protein	-
OG915_RS29410 (OG915_29440)	tig	6650839..6652227 (+)	1389	WP_326787792.1	trigger factor	-
OG915_RS29415 (OG915_29445)	clpP	6652684..6653289 (+)	606	WP_060897745.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG915_RS29420 (OG915_29450)	clpP	6653407..6654087 (+)	681	WP_261708770.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG915_RS29425 (OG915_29455)	clpX	6654248..6655534 (+)	1287	WP_326787793.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG915_RS29430 (OG915_29460)	-	6655694..6656662 (-)	969	WP_326787794.1	hypothetical protein	-
OG915_RS29435 (OG915_29465)	-	6656800..6659424 (+)	2625	WP_326787795.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46995.89 Da
• Isoelectric Point: 4.8317

>NTDB_id=655244 OG915_RS29425 WP_326787793.1 6654248..6655534(+) (clpX) [Streptomyces sp. NBC_00151]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLRNVNPTLIPRDVRRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=655244 OG915_RS29425 WP_326787793.1 6654248..6655534(+) (clpX) [Streptomyces sp. NBC_00151]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTATGTGGTCGGGCAGGAGTCG
GCCAAGAAGGCCCTCTCCGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACAGCACGGGCCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGCGATGTGTCGGGTGAGGGCGTACAGCAGGCCC
TGCTCAAGATCCTCGAGGGAACGACGGCCTCGGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGTGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCAGACCGGCGCCCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGCCGTGATGTACGAAGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTGCGCAACGTCAACCCGACCCTGATCCCGAGGGACGTCCGCCGCGGCGGACCCGGCGAGCAGAAGAC
GGCCTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.995	96.495	0.521