Detailed information NTG0655053

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG851_RS14935
• Genome accession: NZ_CP108156
• Coordinates: 3217231..3218517 (-)
• Length: 428 a.a.
• NCBI ID: WP_030159377.1
• Uniprot ID: A0A5J6JHR3
• Organism: Streptomyces sp. NBC_00161
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3212231..3223517

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG851_RS14920 (OG851_14900)	-	3213171..3215792 (-)	2622	WP_266629273.1	valine--tRNA ligase	-
OG851_RS14925 (OG851_14905)	-	3215921..3216850 (+)	930	WP_266629271.1	hypothetical protein	-
OG851_RS14930 (OG851_14910)	-	3216905..3217117 (-)	213	WP_266629269.1	hypothetical protein	-
OG851_RS14935 (OG851_14915)	clpX	3217231..3218517 (-)	1287	WP_030159377.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG851_RS14940 (OG851_14920)	clpP	3218671..3219342 (-)	672	WP_323179072.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG851_RS14945 (OG851_14925)	clpP	3219429..3220046 (-)	618	WP_266629264.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG851_RS14950 (OG851_14930)	tig	3220370..3221773 (-)	1404	WP_266629262.1	trigger factor	-
OG851_RS14965 (OG851_14945)	-	3222324..3223478 (-)	1155	WP_406512078.1	tyrosine-type recombinase/integrase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46925.81 Da
• Isoelectric Point: 4.7271

>NTDB_id=655053 OG851_RS14935 WP_030159377.1 3217231..3218517(-) (clpX) [Streptomyces sp. NBC_00161]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVRSNVNPTLVPRIVPKDQGPQEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=655053 OG851_RS14935 WP_030159377.1 3217231..3218517(-) (clpX) [Streptomyces sp. NBC_00161]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCTCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCCCTCTCGGTGGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCGACGGGCTCGGGCAAGACGCTCCTCGCCCAGA
CGCTCGCGCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTCGAGGGCACGACGGCCTCGGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTCGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCCGTGATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTGGAGCCGCGGAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
CGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGACGTCGTCCGCTCGAACGTCAACCCGACGCTGGTCCCCCGCATCGTCCCGAAGGACCAGGGCCCGCAGGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

3D structure

• AlphaFold DB: A0A5J6JHR3

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519