Detailed information NTG0653914

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA30_RS10520
• Genome accession: NZ_CP108109
• Coordinates: 2517165..2518448 (-)
• Length: 427 a.a.
• NCBI ID: WP_328913555.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00223
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2512165..2523448

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA30_RS10510 (OHA30_10500)	-	2513250..2515883 (-)	2634	WP_328913553.1	valine--tRNA ligase	-
OHA30_RS10515 (OHA30_10505)	-	2516064..2517083 (+)	1020	WP_328913554.1	hypothetical protein	-
OHA30_RS10520 (OHA30_10510)	clpX	2517165..2518448 (-)	1284	WP_328913555.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA30_RS10525 (OHA30_10515)	clpP	2518664..2519350 (-)	687	WP_328917809.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA30_RS10530 (OHA30_10520)	clpP	2519454..2520071 (-)	618	WP_328917810.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA30_RS10535 (OHA30_10525)	tig	2520364..2521794 (-)	1431	WP_328913556.1	trigger factor	-
OHA30_RS10550 (OHA30_10540)	-	2522326..2522778 (-)	453	WP_328913557.1	Lrp/AsnC family transcriptional regulator	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46696.62 Da
• Isoelectric Point: 4.8710

>NTDB_id=653914 OHA30_RS10520 WP_328913555.1 2517165..2518448(-) (clpX) [Streptomyces sp. NBC_00223]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEDLPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGESGRAGHDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGEDV
ENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQI
DTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELNLADQFSEIMPEDLVKFGMIPEFIGRLPVITSVHNLDRE
ALLQILLEPRNALVKQYQKLFELDGVELEFEHGALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRQDVARVVITA
EVVHSNVNPTLVPREPRIVGKGEQKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=653914 OHA30_RS10520 WP_328913555.1 2517165..2518448(-) (clpX) [Streptomyces sp. NBC_00223]
GTGGCACGCATCGGTGACGGTGGAGACCTGCTGAAGTGCTCATTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTTGCCGAGTCCT
CCGAGGTGCGCTGGGAGGATCTGCCCAAGCCGCGGGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCC
GCGAAGAAGGCCCTGTCGGTGGCGGTCTACAACCACTACAAGCGGGTCCAGGCGGGTGAGAGCGGCCGCGCGGGCCACGA
CGACGCCATCGAGCTGGCCAAGTCCAACATCCTGCTGCTCGGCCCCACCGGCTCCGGCAAGACGCTGCTGGCCCAGACCC
TGGCCCGGATGCTCAATGTGCCCTTCGCCATCGCCGACGCCACCGCGCTCACCGAGGCCGGGTACGTCGGCGAGGACGTG
GAGAACATCCTCCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGACGA
GATCGACAAGGTCGCCCGCAAGAGCGAGAATCCGTCGATCACCCGTGATGTCTCGGGCGAGGGCGTGCAGCAGGCGCTGC
TGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAGATC
GACACCACGAATGTGCTGTTCATCGTGGGCGGCGCCTTCGCGGGTCTGGAGAAGATCATCGAGTCCAGGGCCGGCGCCAA
GGGCATCGGCTTCGGCGCGACCATCCGCTCCAAGCGCGAGCTGAACCTGGCCGACCAGTTCTCCGAGATCATGCCGGAGG
ACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACCAGCGTGCACAACCTGGACCGCGAG
GCGCTGCTGCAGATCCTGCTCGAACCGCGCAACGCGCTGGTGAAGCAGTATCAGAAGCTCTTCGAACTCGACGGTGTGGA
GCTGGAGTTCGAGCACGGCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGGCAGACCGGCGCGCGCGGTCTGCGGG
CCATCATGGAGGAAGTCCTGATGTCGGTGATGTACGAGGTGCCGTCCCGCCAGGACGTGGCCCGCGTCGTCATCACCGCG
GAGGTCGTGCACTCCAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCGGCAAGGGCGAGCAGAAGAGCGC
CTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (317-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (114-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.591	93.911	0.597
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	55.097	96.487	0.532