Detailed information NTG0653787

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG537_RS28355
• Genome accession: NZ_CP108102
• Coordinates: 6397435..6398721 (+)
• Length: 428 a.a.
• NCBI ID: WP_266768669.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00228
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6392435..6403721

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG537_RS28325 (OG537_28300)	-	6393506..6393700 (+)	195	WP_026178055.1	hypothetical protein	-
OG537_RS28340 (OG537_28315)	tig	6394302..6395687 (+)	1386	WP_328831437.1	trigger factor	-
OG537_RS28345 (OG537_28320)	clpP	6395942..6396544 (+)	603	WP_033285987.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG537_RS28350 (OG537_28325)	clpP	6396594..6397274 (+)	681	WP_328831439.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG537_RS28355 (OG537_28330)	clpX	6397435..6398721 (+)	1287	WP_266768669.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG537_RS28360 (OG537_28335)	-	6398801..6399808 (-)	1008	WP_328933974.1	hypothetical protein	-
OG537_RS28365 (OG537_28340)	-	6399945..6402569 (+)	2625	WP_328831441.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46841.63 Da
• Isoelectric Point: 4.7360

>NTDB_id=653787 OG537_RS28355 WP_266768669.1 6397435..6398721(+) (clpX) [Streptomyces sp. NBC_00228]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELQSKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYERLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=653787 OG537_RS28355 WP_266768669.1 6397435..6398721(+) (clpX) [Streptomyces sp. NBC_00228]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGCCAGGAGTCG
GCGAAGAAGGCGCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGTGGCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCCCAGA
CCCTGGCCCGCATGCTGAACGTGCCGTTCGCGATCGCCGACGCGACCGCGCTCACGGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGAGCGGAGAAGGCGTCCAGCAGGCCC
TGTTGAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGCCGGAAACACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCAGGGCCGGCGC
CAAGGGCATCGGCTTCGGGGCGACCATCCGCTCGAAGCGGGAGCTGCAGTCGAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGGCGGCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCACTCGTCAAGCAGTACGAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCGCTCGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGACTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGCGTCATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GCGGACGTGGTCCTGTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCACGCGGCCGGGGCCCGGGGGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.189	93.925	0.584
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.771	96.028	0.516