Detailed information NTG0653674

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG230_RS11915
• Genome accession: NZ_CP108101
• Coordinates: 2730179..2731477 (-)
• Length: 432 a.a.
• NCBI ID: WP_328910151.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00234
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2725179..2736477

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG230_RS11905 (OG230_11905)	-	2726359..2728980 (-)	2622	WP_328910149.1	valine--tRNA ligase	-
OG230_RS11910 (OG230_11910)	-	2729118..2730098 (+)	981	WP_328910150.1	hypothetical protein	-
OG230_RS11915 (OG230_11915)	clpX	2730179..2731477 (-)	1299	WP_328910151.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG230_RS11920 (OG230_11920)	clpP	2731633..2732316 (-)	684	WP_328910152.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG230_RS11925 (OG230_11925)	-	2732392..2732997 (-)	606	WP_328911377.1	ATP-dependent Clp protease proteolytic subunit	-
OG230_RS11930 (OG230_11930)	tig	2733259..2734647 (-)	1389	WP_328910153.1	trigger factor	-
OG230_RS11945 (OG230_11945)	-	2735192..2735386 (-)	195	WP_173313276.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47389.24 Da
• Isoelectric Point: 4.8305

>NTDB_id=653674 OG230_RS11915 WP_328910151.1 2730179..2731477(-) (clpX) [Streptomyces sp. NBC_00234]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENSSGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQKLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=653674 OG230_RS11915 WP_328910151.1 2730179..2731477(-) (clpX) [Streptomyces sp. NBC_00234]
GTGGCACGCATCGGTGATGGCGGCGACTTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGATGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAGCTTCCCAAACCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACAGCAGCGGTGCGAACCG
CGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCTCCGGTCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGGTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGTCTGCCCGTGCTGACCTCGGTCCACAACCTGGACCGC
GAGGCACTGCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGAAGCTGTTCGAACTCGACGGCGT
GGAGCTGGAGTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACGGGCGCCCGTGGTCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACA
CCGGACGTCGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.179	93.056	0.597
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.369	95.37	0.519