Detailed information NTG0653368

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT52_RS20755
• Genome accession: NZ_CP108093
• Coordinates: 4806474..4807772 (+)
• Length: 432 a.a.
• NCBI ID: WP_328721678.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00247
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4801474..4812772

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT52_RS20725 (OHT52_20705)	-	4802172..4802366 (+)	195	WP_328721676.1	hypothetical protein	-
OHT52_RS20740 (OHT52_20720)	tig	4803114..4804490 (+)	1377	WP_328721677.1	trigger factor	-
OHT52_RS20745 (OHT52_20725)	-	4804938..4805543 (+)	606	WP_328723828.1	ATP-dependent Clp protease proteolytic subunit	-
OHT52_RS20750 (OHT52_20730)	clpP	4805633..4806316 (+)	684	WP_328723829.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT52_RS20755 (OHT52_20735)	clpX	4806474..4807772 (+)	1299	WP_328721678.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT52_RS20760 (OHT52_20740)	-	4807868..4808905 (-)	1038	WP_328721679.1	hypothetical protein	-
OHT52_RS20765 (OHT52_20745)	-	4809043..4811664 (+)	2622	WP_328721680.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47362.18 Da
• Isoelectric Point: 4.8277

>NTDB_id=653368 OHT52_RS20755 WP_328721678.1 4806474..4807772(+) (clpX) [Streptomyces sp. NBC_00247]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGSSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRSGAKGIGFGATIRSKLEIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
PDVVRNNVNPTLVPREPRTIGKNDGGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=653368 OHT52_RS20755 WP_328721678.1 4806474..4807772(+) (clpX) [Streptomyces sp. NBC_00247]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAGGAACTCGCCGAGACCT
CGGAAGTGCGCTGGGAGGAACTCCCCAAGCCACGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTGTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGGGAGAACGGCGGCGGTTCCAGCCG
GGACGACGCCATCGAGCTCGCCAAGTCGAACATCCTCCTGCTGGGCCCCACGGGTTCCGGCAAGACCCTGCTGGCGCAGA
CACTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTCTCGGGCGAGGGCGTGCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGTCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGGTCCAAGCTGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTCCCCGTCCTCACCTCGGTGCACAACCTGGACCGT
GAGGCGCTGCTCCAGATCCTCATCGAGCCGCGGAACGCCCTGGTGAAGCAGTACCAGCGGCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGCGTGGTCATCACC
CCGGACGTGGTCCGCAACAACGTGAACCCCACGCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGAACGACGGCGGCAG
GCACGAGAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	64.179	93.056	0.597
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.37	0.509