Detailed information NTG0653033

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG718_RS35190
• Genome accession: NZ_CP108081
• Coordinates: 7914161..7915447 (+)
• Length: 428 a.a.
• NCBI ID: WP_143632143.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00258
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7909161..7920447

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG718_RS35160 (OG718_35145)	-	7909331..7910170 (+)	840	WP_260694832.1	alpha/beta hydrolase	-
OG718_RS35175 (OG718_35160)	tig	7910760..7912190 (+)	1431	WP_143632147.1	trigger factor	-
OG718_RS35180 (OG718_35165)	clpP	7912613..7913218 (+)	606	WP_186001018.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG718_RS35185 (OG718_35170)	clpP	7913320..7914000 (+)	681	WP_143632144.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG718_RS35190 (OG718_35175)	clpX	7914161..7915447 (+)	1287	WP_143632143.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG718_RS35195 (OG718_35180)	-	7915627..7915893 (+)	267	WP_143632142.1	hypothetical protein	-
OG718_RS35200 (OG718_35185)	-	7915995..7916936 (-)	942	WP_143632140.1	hypothetical protein	-
OG718_RS35205 (OG718_35190)	-	7917071..7919701 (+)	2631	WP_143632138.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46949.77 Da
• Isoelectric Point: 4.8346

>NTDB_id=653033 OG718_RS35190 WP_143632143.1 7914161..7915447(+) (clpX) [Streptomyces sp. NBC_00258]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSAGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKREMESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREAMEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVRSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=653033 OG718_RS35190 WP_143632143.1 7914161..7915447(+) (clpX) [Streptomyces sp. NBC_00258]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCTGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTCCCCAAACCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTAGGCCAGGAGTCC
GCCAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGCGAGAACAGCGCGGGTCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTTCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTCGCGCAGA
CCCTGGCACGCATGCTGAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTATGTCGGTGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCTCGTAAGAGCGAAAACCCGTCGATCACGCGGGATGTGAGCGGCGAGGGTGTGCAGCAGGCCC
TGCTGAAGATTCTCGAAGGCACCACGGCCTCGGTCCCGCCCCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGGCTGGAGAAGCTGATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGATGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCCG
AGGACCTCGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTGCCCGTCATCACTTCGGTGCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTCGTCGAGCCCCGCAACGCGCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCATGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGAGTCGTCATCACG
GCAGAAGCCGTCCGCTCGAACGTGAACCCGACCCTGATCCCGCGGGACGCGCGGGGGCGGGGGCCGGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519