Detailed information NTG0652760

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA28_RS31140
• Genome accession: NZ_CP108075
• Coordinates: 6863513..6864799 (+)
• Length: 428 a.a.
• NCBI ID: WP_116512991.1
• Uniprot ID: A0ABV4SEI4
• Organism: Streptomyces sp. NBC_00269
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6858513..6869799

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA28_RS31110 (OHA28_31145)	-	6859652..6859846 (+)	195	WP_100594330.1	hypothetical protein	-
OHA28_RS31125 (OHA28_31160)	tig	6860363..6861751 (+)	1389	WP_266564251.1	trigger factor	-
OHA28_RS31130 (OHA28_31165)	clpP	6862036..6862644 (+)	609	WP_266569404.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA28_RS31135 (OHA28_31170)	clpP	6862698..6863357 (+)	660	WP_227294656.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA28_RS31140 (OHA28_31175)	clpX	6863513..6864799 (+)	1287	WP_116512991.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA28_RS31145 (OHA28_31180)	-	6864881..6865855 (-)	975	WP_326713021.1	hypothetical protein	-
OHA28_RS31150 (OHA28_31185)	-	6866041..6868671 (+)	2631	WP_326713022.1	valine--tRNA ligase	-
OHA28_RS31155 (OHA28_31190)	-	6868797..6869435 (-)	639	WP_326713023.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46850.55 Da
• Isoelectric Point: 4.7856

>NTDB_id=652760 OHA28_RS31140 WP_116512991.1 6863513..6864799(+) (clpX) [Streptomyces sp. NBC_00269]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILLEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDVRGSGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=652760 OHA28_RS31140 WP_116512991.1 6863513..6864799(+) (clpX) [Streptomyces sp. NBC_00269]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAAGGCTATGTCGTCGGCCAGGAGGCC
GCGAAGAAAGCCCTCTCGGTCGCTGTGTACAACCATTACAAGCGGGTTCAGGCCGGTGAGAACGGCGGAGCCCAGGGACG
CGACGACGCGATCGAGCTGTCGAAGTCCAACATCCTGCTCCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCCGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGTGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTCGAGGGGACCACGGCTTCCGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCATCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTCCTGGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCGCACAGGCGCGCGCGGCCTGC
GTGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCAGAGGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCCCGCGACGTCCGCGGCTCGGGCAGCGGAGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.479	96.495	0.526