Detailed information NTG0652638

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG798_RS20885
• Genome accession: NZ_CP108070
• Coordinates: 4505116..4506402 (-)
• Length: 428 a.a.
• NCBI ID: WP_067370615.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00271
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 4500116..4511402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG798_RS20875 (OG798_20950)	-	4501250..4503874 (-)	2625	WP_095854688.1	valine--tRNA ligase	-
OG798_RS20880 (OG798_20955)	-	4504011..4505006 (+)	996	WP_095854687.1	hypothetical protein	-
OG798_RS20885 (OG798_20960)	clpX	4505116..4506402 (-)	1287	WP_067370615.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG798_RS20890 (OG798_20965)	clpP	4506574..4507254 (-)	681	WP_060897739.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG798_RS20895 (OG798_20970)	clpP	4507394..4507999 (-)	606	WP_054231895.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG798_RS20900 (OG798_20975)	tig	4508431..4509837 (-)	1407	WP_095854685.1	trigger factor	-
OG798_RS20915 (OG798_20990)	-	4510649..4510843 (-)	195	WP_054231893.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46751.59 Da
• Isoelectric Point: 4.8201

>NTDB_id=652638 OG798_RS20885 WP_067370615.1 4505116..4506402(-) (clpX) [Streptomyces sp. NBC_00271]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENGGGQSRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
PALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=652638 OG798_RS20885 WP_067370615.1 4505116..4506402(-) (clpX) [Streptomyces sp. NBC_00271]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAAGAAGAACTCGCGGAAACGA
GCGAGGTCCGCTGGGAGGAGCTCCCGAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTACGTGGTCGGCCAGGAGTCG
GCCAAGAAAGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGTCAGAGCCG
GGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACTCTGCTCGCCCAGA
CGCTCGCGCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACGGGCATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGTAAGAGCGAAAACCCGTCGATCACGCGAGACGTGTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTCAAGATCCTGGAGGGCACGACGGCCTCCGTTCCGCCCCAGGGCGGACGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCGAGGGCGGGTGC
CAAGGGCATCGGCTTCGGTGCGACGATCCGCTCCAAGCGCGAGCTCGAGTCCAAGGACCAGTTCGAGGCGGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGGCTGCCCGTCATCACCTCGGTCCACAACCTCGACCGG
CCGGCGCTCCTCCAGATCCTCGTCGAGCCGCGCAACGCGCTCGTGAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCGATCCTCCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGGCGGTGATGTACGAGGTTCCCTCGCGCAAGGACGTGGCGAGGGTGGTCATCACG
GCGGACGTCGTCCTGTCCAACGTGAACCCGACGCTGATCCCGCGCGACGCCCGCGGGCGCGGCCCGGGCGAGCAGAAGAC
GGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.779	94.159	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521