Detailed information NTG0652498

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG386_RS28245
• Genome accession: NZ_CP108067
• Coordinates: 6382127..6383413 (+)
• Length: 428 a.a.
• NCBI ID: WP_030008569.1
• Uniprot ID: A0ABQ3SUV3
• Organism: Streptomyces sp. NBC_00273
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6377127..6388413

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG386_RS28215 (OG386_28225)	-	6377274..6377897 (+)	624	WP_328790438.1	hypothetical protein	-
OG386_RS28230 (OG386_28245)	tig	6378967..6380355 (+)	1389	WP_328790439.1	trigger factor	-
OG386_RS28235 (OG386_28250)	clpP	6380636..6381253 (+)	618	WP_030008567.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG386_RS28240 (OG386_28255)	clpP	6381308..6381973 (+)	666	WP_150257432.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG386_RS28245 (OG386_28260)	clpX	6382127..6383413 (+)	1287	WP_030008569.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG386_RS28250 (OG386_28265)	-	6383491..6384432 (-)	942	WP_328790440.1	hypothetical protein	-
OG386_RS28255 (OG386_28270)	-	6384560..6387208 (+)	2649	WP_328790441.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46962.87 Da
• Isoelectric Point: 4.7778

>NTDB_id=652498 OG386_RS28245 WP_030008569.1 6382127..6383413(+) (clpX) [Streptomyces sp. NBC_00273]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SEVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=652498 OG386_RS28245 WP_030008569.1 6382127..6383413(+) (clpX) [Streptomyces sp. NBC_00273]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGACCCGGTGTTTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACCT
CCGAGGTCCGGTGGGAGGAACTCCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGCGCAGGGCCG
GGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTGCTCGCGCAGA
CCCTCGCCCGCATGCTGAACGTCCCCTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACGACCGCCTCCGTACCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGTGCGGGCGC
CAAGGGCATCGGCTTCGGGGCGACGATCCGCTCGAAGCGCGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTGCTGACCTCCGTGCACAACCTGGACCGT
GAGGCCCTGCTCCAGATCCTGATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTCCGCCAGACGGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGAGGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCCCGGATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.925	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519