Detailed information NTG0652083

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT76_RS15265
• Genome accession: NZ_CP108053
• Coordinates: 3359791..3361080 (-)
• Length: 429 a.a.
• NCBI ID: WP_133926274.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00287
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3354791..3366080

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT76_RS15250 (OHT76_15275)	-	3355562..3358186 (-)	2625	WP_328871367.1	valine--tRNA ligase	-
OHT76_RS15255 (OHT76_15280)	-	3358323..3359258 (+)	936	WP_328871368.1	hypothetical protein	-
OHT76_RS15260 (OHT76_15285)	-	3359322..3359603 (-)	282	WP_328871369.1	hypothetical protein	-
OHT76_RS15265 (OHT76_15290)	clpX	3359791..3361080 (-)	1290	WP_133926274.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT76_RS15270 (OHT76_15295)	clpP	3361241..3361921 (-)	681	WP_328871370.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT76_RS15275 (OHT76_15300)	clpP	3362009..3362617 (-)	609	WP_315888001.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT76_RS15280 (OHT76_15305)	tig	3362985..3364388 (-)	1404	WP_328871371.1	trigger factor	-
OHT76_RS15295 (OHT76_15320)	-	3364948..3365142 (-)	195	WP_150949237.1	hypothetical protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46966.78 Da
• Isoelectric Point: 4.7838

>NTDB_id=652083 OHT76_RS15265 WP_133926274.1 3359791..3361080(-) (clpX) [Streptomyces sp. NBC_00287]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGGQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARNGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=652083 OHT76_RS15265 WP_133926274.1 3359791..3361080(-) (clpX) [Streptomyces sp. NBC_00287]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACCA
GTGAGGTGCGCTGGGAGGAGCTCCCGAAGCCCCGTGAGATCTATGAGTTCCTCGAGGGGTATGTGGTGGGCCAGGAGGCG
GCCAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAACGCGTCCAGGCCGGTGAGAACGGCGGCGGTCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCGAACATCCTTCTGCTGGGCCCCACGGGCTCCGGGAAGACCCTGCTGGCCCAGA
CACTCGCCCGGATGCTCAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTGACGGAGGCGGGCTATGTCGGTGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCGCGGAAGAGTGAAAATCCGTCGATCACGCGAGACGTGAGCGGCGAGGGCGTCCAGCAGGCGT
TGCTCAAGATCCTCGAAGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGGCGTAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAACTGGAAGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGGTAGAACCCCGCAACGCCCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCGCGGGGCTTGC
GCGCCATCATGGAAGAGGTGTTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGAGTCGTCATCACA
GCAGACGTCGTCCACTCGAACGTCAACCCGACCCTGATCCCGCGGGACGCGCGGAACGGGCGGGGACCGGGGGAGCAGAA
GACGGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.706	0.587
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.501	95.804	0.522