Detailed information NTG0651744

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA05_RS12000
• Genome accession: NZ_CP108032
• Coordinates: 2714985..2716268 (-)
• Length: 427 a.a.
• NCBI ID: WP_313946325.1
• Uniprot ID: A0ACC6PUA7
• Organism: Streptomyces sp. NBC_00306
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2709985..2721268

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA05_RS11990 (OHA05_12010)	-	2711067..2713691 (-)	2625	WP_328860551.1	valine--tRNA ligase	-
OHA05_RS11995 (OHA05_12015)	-	2713828..2714781 (+)	954	WP_328860552.1	hypothetical protein	-
OHA05_RS12000 (OHA05_12020)	clpX	2714985..2716268 (-)	1284	WP_313946325.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA05_RS12005 (OHA05_12025)	clpP	2716414..2717097 (-)	684	WP_313946324.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA05_RS12010 (OHA05_12030)	-	2717153..2717758 (-)	606	WP_313949012.1	ATP-dependent Clp protease proteolytic subunit	-
OHA05_RS12015 (OHA05_12035)	tig	2717999..2719390 (-)	1392	WP_328860553.1	trigger factor	-
OHA05_RS12030 (OHA05_12050)	-	2719945..2720967 (-)	1023	WP_313946322.1	alcohol dehydrogenase	-
OHA05_RS12035 (OHA05_12055)	-	2721059..2721253 (-)	195	WP_313946321.1	hypothetical protein	-

Sequence

Protein

• Length: 427 a.a.
• Molecular weight: 46714.55 Da
• Isoelectric Point: 4.8265

>NTDB_id=651744 OHA05_RS12000 WP_313946325.1 2714985..2716268(-) (clpX) [Streptomyces sp. NBC_00306]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGAGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
EDVVHNNVNPTLVPRVVKNEGRHEKSA

Nucleotide

• Length: 1284 bp

>NTDB_id=651744 OHA05_RS12000 WP_313946325.1 2714985..2716268(-) (clpX) [Streptomyces sp. NBC_00306]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGTGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTGGCCGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGAGGCGCGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACGCTGCTGGCCCAGA
CGCTCGCCCGCATGCTGAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGGGACGTGTCCGGTGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTCTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATTATCGAGTCGCGGGCGGGAGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCGGAGTTCATCGGCCGCCTCCCCGTACTGACCTCGGTGCACAACCTGGACCGC
GAGGCACTGCTCCAGATCCTGGTCGAGCCGCGGAACGCGCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCGGCGCTGGAGGCGATCGCGGACCAGGCGATCCTGCGCGGCACGGGCGCGCGTGGCCTGC
GGGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGGGTCGTCATCACG
GAGGACGTGGTCCACAACAACGTGAACCCGACGCTGGTGCCGCGGGTCGTGAAGAACGAGGGGCGCCACGAGAAGTCGGC
GTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	94.145	0.6
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.269	96.721	0.515