Detailed information NTG0651418

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG485_RS16405
• Genome accession: NZ_CP108013
• Coordinates: 3747769..3749055 (-)
• Length: 428 a.a.
• NCBI ID: WP_151471405.1
• Uniprot ID: A0A7J5DDX9
• Organism: Streptomyces sp. NBC_00328
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3742769..3754055

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG485_RS16390 (OG485_16410)	-	3743489..3746113 (-)	2625	WP_328669110.1	valine--tRNA ligase	-
OG485_RS16395 (OG485_16415)	-	3746251..3747213 (+)	963	WP_328669111.1	hypothetical protein	-
OG485_RS16400 (OG485_16420)	-	3747289..3747564 (-)	276	WP_328669112.1	hypothetical protein	-
OG485_RS16405 (OG485_16425)	clpX	3747769..3749055 (-)	1287	WP_151471405.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG485_RS16410 (OG485_16430)	clpP	3749216..3749896 (-)	681	WP_328452471.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG485_RS16415 (OG485_16435)	clpP	3750013..3750618 (-)	606	WP_328674493.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG485_RS16420 (OG485_16440)	tig	3751123..3752508 (-)	1386	WP_328669113.1	trigger factor	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46967.83 Da
• Isoelectric Point: 4.8317

>NTDB_id=651418 OG485_RS16405 WP_151471405.1 3747769..3749055(-) (clpX) [Streptomyces sp. NBC_00328]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSTGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLIESRAGAKGIGFGATIRSKRELESKDQFEAVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLRNVNPTLIPRDARRGGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=651418 OG485_RS16405 WP_151471405.1 3747769..3749055(-) (clpX) [Streptomyces sp. NBC_00328]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGGTATGTGGTCGGGCAGGAGTCG
GCCAAGAAGGCCCTCTCCGTAGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACAGCACGGGCCAGAACCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACACTCCTCGCCCAGA
CCCTCGCGCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCGGGATACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAACCCGTCGATCACGCGCGATGTGTCGGGTGAGGGTGTGCAGCAGGCCC
TGCTCAAGATCCTCGAGGGCACCACGGCCTCGGTGCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCGCGGGCCTGGAGAAGCTCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGCGAGCTGGAGTCCAAGGACCAGTTCGAGGCCGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGTCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTCCTCCAGATCCTGGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGTGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCAGACCGGCGCCCGAGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACC
GCCGACGTGGTCCTGCGCAACGTCAACCCGACCCTGATCCCGAGGGACGCCCGCCGGGGTGGTCCCGGGGAGCAGAAGAC
GGCGTAG

Domains

Predicted by InterProScan.

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

3D structure

• AlphaFold DB: A0A7J5DDX9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.438	93.925	0.586
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.258	96.028	0.521