Detailed information NTG0651372

Bioinformatically predicted

Overview

• Name: recG
• Type: Machinery gene
• Locus tag: OHB16_RS25665
• Genome accession: NZ_CP108008
• Coordinates: 5520133..5522370 (+)
• Length: 745 a.a.
• NCBI ID: WP_271320557.1
• Uniprot ID: A0ABV9WRC5
• Organism: Streptomyces sp. NBC_00334
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 5515133..5527370

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB16_RS25635 (OHB16_25640)	-	5515350..5515447 (-)	98	Protein_5045	DUF3515 domain-containing protein	-
OHB16_RS25640 (OHB16_25645)	-	5515496..5515729 (-)	234	WP_003973433.1	Lrp/AsnC ligand binding domain-containing protein	-
OHB16_RS25645 (OHB16_25650)	-	5515957..5516925 (+)	969	WP_271320555.1	thiamine-phosphate kinase	-
OHB16_RS25650 (OHB16_25655)	thiD	5516937..5517764 (+)	828	WP_328661509.1	bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase	-
OHB16_RS25655 (OHB16_25660)	rpmB	5517879..5518064 (-)	186	WP_003993230.1	50S ribosomal protein L28	-
OHB16_RS25660 (OHB16_25665)	-	5518330..5520057 (+)	1728	WP_328659448.1	DAK2 domain-containing protein	-
OHB16_RS25665 (OHB16_25670)	recG	5520133..5522370 (+)	2238	WP_271320557.1	ATP-dependent DNA helicase RecG	Machinery gene
OHB16_RS25670 (OHB16_25675)	rsmD	5522426..5523013 (+)	588	WP_271320558.1	16S rRNA (guanine(966)-N(2))-methyltransferase RsmD	-
OHB16_RS25675 (OHB16_25680)	coaD	5523040..5523519 (+)	480	WP_271320559.1	pantetheine-phosphate adenylyltransferase	-
OHB16_RS25680 (OHB16_25685)	-	5523641..5524759 (+)	1119	WP_328659449.1	cell division initiation protein	-
OHB16_RS25685 (OHB16_25690)	-	5524903..5525556 (+)	654	WP_271320561.1	YceD family protein	-
OHB16_RS25690 (OHB16_25695)	rpmF	5525559..5525732 (+)	174	WP_006139588.1	50S ribosomal protein L32	-
OHB16_RS25695 (OHB16_25700)	rnc	5525740..5526570 (+)	831	WP_328659451.1	ribonuclease III	-

Sequence

Protein

• Length: 745 a.a.
• Molecular weight: 80267.57 Da
• Isoelectric Point: 6.1536

>NTDB_id=651372 OHB16_RS25665 WP_271320557.1 5520133..5522370(+) (recG) [Streptomyces sp. NBC_00334]
MDLVPALREPLKKVLGPATAKVMAEHLGLHTVGDLLHHYPRRYEERGQLTHLADLPMDEHVTVVAQVADARLHSFASSKA
PRGKGQRLEVTITDGSGRLQLVFFGNGVHKPHKELLPGTRAMFAGKVSVFNRRLQLAHPAYELLRGGDDEDDAAESVESW
AGALIPLYPATAKLESWKIGKAIQTVLPSAQEAVDPLPDSLRDGRGLVSLPEALLKIHRPHTKADVEDARARLKWDEAFV
LQVALARRRHAETQLPAVPRKPGADGLLTAFDDRLPFTLTDGQQNVSREIFDDLATDHPMHRLLQGEVGSGKTLVALRAM
LAVVDSGGQAVMLAPTEVLAQQHHRSVVEMMGELAEGGMLGGAEHATKVVLLTGSMGAAARRHALLDLATGEAGIVIGTH
ALIEDKVQFHDLGLVVVDEQHRFGVEQRDALRGKGKQPPHLLVMTATPIPRTVAMTVFGDLETSVLDQLPAGRSPIASHV
VPAADKPHFLARAWERVREEVSNGHQAYVVCPRIGDEDDAPKKGAKQPGQSEQPPGGDAEKRPPLAVLDVADGLAKGPLQ
GLGVEILHGRMQPDDKDAVMRRFAAGETDVLVATTVIEVGVNVPNATAMVIMDADRFGVSQLHQLRGRVGRGSAPGLCLL
VSEMPEASAARQRLNAVASTRDGFELSRIDLEQRREGDVLGQAQSGARTSLRVLAVIEDEEIIAEARQEAAAVVAADPEL
TGLPGLRTALEALLDDEREQYLEKG

Nucleotide

• Length: 2238 bp

>NTDB_id=651372 OHB16_RS25665 WP_271320557.1 5520133..5522370(+) (recG) [Streptomyces sp. NBC_00334]
ATGGATCTCGTGCCCGCACTGCGAGAACCCCTGAAGAAGGTGCTCGGCCCCGCCACCGCGAAGGTGATGGCCGAGCACCT
CGGCCTGCACACCGTCGGCGACCTCCTCCACCACTACCCCCGCAGATACGAGGAGCGCGGCCAGCTCACCCACCTCGCCG
ACCTGCCCATGGACGAGCACGTCACGGTGGTGGCCCAGGTCGCCGACGCCCGCCTGCACTCCTTCGCCTCGTCGAAGGCC
CCGCGCGGCAAGGGCCAGCGCCTGGAGGTGACCATCACGGACGGCAGCGGCCGCCTCCAACTGGTCTTCTTCGGCAACGG
GGTCCACAAACCCCACAAGGAACTCCTGCCGGGCACCCGCGCGATGTTCGCCGGCAAGGTCTCCGTCTTCAACCGCCGAC
TGCAACTGGCCCACCCGGCGTACGAGTTGCTGCGCGGCGGTGACGACGAGGACGACGCGGCCGAGAGCGTCGAGTCGTGG
GCGGGCGCCCTCATCCCCCTCTACCCGGCCACCGCCAAACTGGAGTCCTGGAAGATCGGCAAGGCGATCCAGACGGTGCT
GCCCAGCGCCCAGGAGGCCGTCGACCCGCTCCCCGACTCCCTGCGCGACGGCAGGGGCCTGGTCTCCCTGCCCGAGGCCC
TCCTCAAGATCCACCGCCCGCACACCAAGGCCGACGTCGAGGACGCCCGCGCCCGCCTGAAGTGGGACGAGGCATTCGTC
CTCCAGGTCGCCCTCGCGCGCCGCAGGCACGCCGAGACCCAACTCCCCGCCGTCCCGAGGAAGCCCGGCGCCGACGGGCT
GCTCACCGCCTTCGACGACCGGCTCCCCTTCACCCTCACCGACGGCCAGCAGAACGTCTCCCGCGAGATCTTCGACGACC
TCGCCACCGACCACCCGATGCACCGGCTGCTCCAGGGCGAGGTGGGCAGCGGCAAGACCCTGGTCGCCCTGCGCGCCATG
CTCGCCGTCGTCGACTCCGGCGGGCAGGCCGTGATGCTGGCGCCCACCGAGGTGCTCGCCCAGCAGCACCACCGCTCCGT
CGTCGAGATGATGGGCGAGCTGGCCGAGGGGGGAATGCTGGGCGGCGCCGAGCACGCCACCAAGGTGGTGCTGCTCACCG
GGTCGATGGGCGCGGCAGCCCGCCGGCACGCCCTGCTCGACCTGGCCACCGGCGAGGCGGGCATCGTCATCGGCACCCAC
GCCCTGATCGAGGACAAGGTGCAGTTCCACGACCTCGGTCTGGTCGTCGTCGACGAACAGCACCGCTTCGGCGTCGAGCA
GCGCGACGCCCTGCGCGGCAAGGGGAAGCAGCCCCCGCACCTGCTCGTGATGACCGCGACGCCCATCCCGCGCACCGTCG
CGATGACCGTCTTCGGCGACCTGGAGACCTCGGTCCTCGACCAGCTCCCGGCCGGCCGGTCCCCGATCGCCAGCCACGTC
GTCCCCGCCGCCGACAAGCCCCACTTCCTCGCCCGCGCCTGGGAACGCGTCCGCGAGGAGGTCTCCAACGGCCACCAGGC
GTACGTCGTCTGCCCGCGCATCGGCGACGAGGACGACGCCCCGAAGAAGGGCGCCAAGCAGCCCGGACAGTCCGAGCAGC
CGCCCGGGGGCGACGCCGAGAAGCGCCCCCCGCTGGCCGTCCTCGACGTCGCCGACGGCCTGGCCAAGGGCCCGCTCCAG
GGACTCGGGGTGGAGATCCTGCACGGCCGGATGCAGCCCGACGACAAGGACGCGGTCATGCGCCGCTTCGCCGCCGGGGA
GACCGACGTCCTGGTCGCCACCACCGTCATCGAGGTCGGCGTCAACGTCCCCAACGCCACCGCGATGGTGATCATGGACG
CCGACCGCTTCGGCGTCTCCCAGCTCCACCAGCTGCGCGGCCGCGTGGGCCGCGGTTCCGCCCCCGGCCTGTGCCTGCTG
GTCAGCGAGATGCCCGAGGCGAGCGCGGCCCGGCAGCGGCTGAACGCCGTCGCGAGCACCCGCGACGGCTTCGAGCTCTC
CCGCATCGACCTCGAACAGCGCCGCGAGGGCGACGTCCTCGGACAGGCCCAGTCCGGCGCCCGCACCTCCCTGCGCGTGC
TCGCCGTCATCGAGGACGAGGAGATCATCGCCGAGGCCAGACAGGAGGCGGCCGCGGTCGTCGCCGCCGACCCGGAGCTG
ACCGGCCTGCCGGGGCTGCGCACGGCCCTGGAGGCACTGCTGGACGACGAGCGGGAGCAGTACCTGGAGAAGGGTTGA

Domains

Predicted by InterProScan.

• Helicase conserved C-terminal domain (Helicase_C) (561-632)

• ATP-dependent DNA helicase RecG, domain 3, C-terminal (RecG_dom3_C) (660-721)

• OB-fold nucleic acid binding domain (tRNA_anti-codon) (61-144)

• DEAD/DEAH box helicase (DEAD) (301-453)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
recG	Neisseria meningitidis strain C311	37.997	97.852	0.372
recG/mmsA	Streptococcus pneumoniae R6	37.415	98.658	0.369
recG/mmsA	Streptococcus pneumoniae R36A	37.415	98.658	0.369
recG	Bacillus subtilis subsp. subtilis str. 168	38.244	94.765	0.362