Detailed information NTG0651273

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA37_RS25670
• Genome accession: NZ_CP108006
• Coordinates: 5695258..5696544 (+)
• Length: 428 a.a.
• NCBI ID: WP_250739478.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00335
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5690258..5701544

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA37_RS25655 (OHA37_25660)	tig	5691989..5693401 (+)	1413	WP_266908914.1	trigger factor	-
OHA37_RS25660 (OHA37_25665)	-	5693723..5694340 (+)	618	WP_250739480.1	ATP-dependent Clp protease proteolytic subunit	-
OHA37_RS25665 (OHA37_25670)	clpP	5694453..5695103 (+)	651	WP_243334852.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA37_RS25670 (OHA37_25675)	clpX	5695258..5696544 (+)	1287	WP_250739478.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA37_RS25675 (OHA37_25680)	-	5697053..5698024 (-)	972	WP_266908918.1	hypothetical protein	-
OHA37_RS25680 (OHA37_25685)	-	5698152..5700773 (+)	2622	WP_266908920.1	valine--tRNA ligase	-
OHA37_RS25685 (OHA37_25690)	-	5700862..5701443 (-)	582	WP_266908922.1	vitamin K epoxide reductase family protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46950.82 Da
• Isoelectric Point: 4.8219

>NTDB_id=651273 OHA37_RS25670 WP_250739478.1 5695258..5696544(+) (clpX) [Streptomyces sp. NBC_00335]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASNQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=651273 OHA37_RS25670 WP_250739478.1 5695258..5696544(+) (clpX) [Streptomyces sp. NBC_00335]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACCT
CCGAGGTTCGCTGGGAAGAACTTCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCCGGAGAGAACGGCGGCGGGACGGGCCG
TGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACGCTGCTGGCCCAGA
CGCTCGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTCACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAAACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGCGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACCACCGCTTCCGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGCCTGGAGCGGATCATCGAGTCCCGCGCCGGCGC
CAAGGGCATCGGCTTCGGGGCGACCATCCGCTCGAAGCGCGAGATCGAGGCGAGCAACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTGCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTCGAAGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGACGTGGTCCGCTCCAACGTCAACCCGACGCTGGTCCCGCGGATCGTCCCGAAGGACCAGGGCCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519