Detailed information
Bioinformatically predicted
Overview
| Name | crp | Type | Regulator |
| Locus tag | L2Z06_RS14100 | Genome accession | NZ_CP091368 |
| Coordinates | 2939764..2940429 (-) | Length | 221 a.a. |
| NCBI ID | WP_000203219.1 | Uniprot ID | A0A219CAS9 |
| Organism | Acinetobacter baumannii strain AB167-VUB | ||
| Function | regulate competence development (predicted from homology) Competence regulation |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 2884236..2942610 | 2939764..2940429 | within | 0 |
| IScluster/Tn | 2938617..2939707 | 2939764..2940429 | flank | 57 |
Gene organization within MGE regions
Location: 2884236..2942610
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L2Z06_RS13860 (L2Z06_13860) | dnaQ | 2884236..2885615 (-) | 1380 | WP_000084042.1 | DNA polymerase III subunit epsilon | - |
| L2Z06_RS13865 (L2Z06_13865) | - | 2885848..2889063 (+) | 3216 | WP_000277826.1 | LysM peptidoglycan-binding domain-containing protein | - |
| L2Z06_RS13870 (L2Z06_13870) | - | 2889079..2890914 (+) | 1836 | WP_001171034.1 | extracellular solute-binding protein | - |
| L2Z06_RS13875 (L2Z06_13875) | yejB | 2890944..2891996 (+) | 1053 | WP_000536107.1 | microcin C ABC transporter permease YejB | - |
| L2Z06_RS13880 (L2Z06_13880) | - | 2891996..2893006 (+) | 1011 | WP_000008530.1 | ABC transporter permease | - |
| L2Z06_RS13885 (L2Z06_13885) | - | 2892984..2894573 (+) | 1590 | WP_000550783.1 | dipeptide ABC transporter ATP-binding protein | - |
| L2Z06_RS13890 (L2Z06_13890) | - | 2894759..2896003 (+) | 1245 | WP_000077974.1 | NADH:flavin oxidoreductase/NADH oxidase family protein | - |
| L2Z06_RS13895 (L2Z06_13895) | - | 2896062..2898176 (-) | 2115 | WP_000364465.1 | TonB-dependent receptor | - |
| L2Z06_RS13905 (L2Z06_13905) | rnt | 2898454..2899116 (-) | 663 | WP_001982681.1 | ribonuclease T | - |
| L2Z06_RS13910 (L2Z06_13910) | pyrC | 2899101..2900135 (-) | 1035 | WP_001084867.1 | dihydroorotase | - |
| L2Z06_RS13915 (L2Z06_13915) | - | 2900285..2901547 (+) | 1263 | WP_000013374.1 | diguanylate cyclase | - |
| L2Z06_RS13920 (L2Z06_13920) | argG | 2901606..2902964 (-) | 1359 | WP_001986427.1 | argininosuccinate synthase | - |
| L2Z06_RS13925 (L2Z06_13925) | - | 2903230..2905260 (+) | 2031 | WP_000205077.1 | NADPH-dependent 2,4-dienoyl-CoA reductase | - |
| L2Z06_RS13935 (L2Z06_13935) | - | 2905600..2905971 (-) | 372 | Protein_2690 | M48 family metalloprotease | - |
| L2Z06_RS13940 (L2Z06_13940) | - | 2906036..2906740 (+) | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| L2Z06_RS13945 (L2Z06_13945) | - | 2906770..2907309 (+) | 540 | WP_029642339.1 | recombinase family protein | - |
| L2Z06_RS13950 (L2Z06_13950) | - | 2907492..2908352 (+) | 861 | WP_000027057.1 | broad-spectrum class A beta-lactamase TEM-1 | - |
| L2Z06_RS13955 (L2Z06_13955) | - | 2908423..2909127 (-) | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| L2Z06_RS13960 (L2Z06_13960) | - | 2909188..2912040 (+) | 2853 | Protein_2695 | Tn3 family transposase | - |
| L2Z06_RS13965 (L2Z06_13965) | - | 2912151..2912810 (+) | 660 | WP_000904905.1 | recombinase family protein | - |
| L2Z06_RS13970 (L2Z06_13970) | - | 2912822..2913526 (+) | 705 | WP_001067858.1 | IS6-like element IS26 family transposase | - |
| L2Z06_RS13975 (L2Z06_13975) | - | 2913618..2913797 (+) | 180 | WP_000902128.1 | hypothetical protein | - |
| L2Z06_RS13980 (L2Z06_13980) | - | 2913951..2914766 (-) | 816 | WP_000018326.1 | aminoglycoside O-phosphotransferase APH(3')-Ia | - |
| L2Z06_RS13985 (L2Z06_13985) | - | 2914896..2915600 (+) | 705 | WP_001067855.1 | IS6-like element IS26 family transposase | - |
| L2Z06_RS13990 (L2Z06_13990) | - | 2915660..2916283 (+) | 624 | WP_000107496.1 | TetR/AcrR family transcriptional regulator | - |
| L2Z06_RS13995 (L2Z06_13995) | - | 2916348..2917070 (-) | 723 | WP_000459997.1 | pirin family protein | - |
| L2Z06_RS14000 (L2Z06_14000) | - | 2917581..2918543 (+) | 963 | WP_000226456.1 | metal-dependent hydrolase | - |
| L2Z06_RS14005 (L2Z06_14005) | - | 2918609..2919466 (+) | 858 | WP_070433490.1 | SDR family NAD(P)-dependent oxidoreductase | - |
| L2Z06_RS14010 (L2Z06_14010) | - | 2919489..2920418 (-) | 930 | WP_001091151.1 | IS5-like element ISAba10 family transposase | - |
| L2Z06_RS14015 (L2Z06_14015) | - | 2920496..2922046 (+) | 1551 | WP_000256760.1 | NAD(P)/FAD-dependent oxidoreductase | - |
| L2Z06_RS14020 (L2Z06_14020) | - | 2922413..2922640 (+) | 228 | WP_000608973.1 | hypothetical protein | - |
| L2Z06_RS14025 (L2Z06_14025) | - | 2922963..2924282 (+) | 1320 | WP_000729980.1 | NCS2 family permease | - |
| L2Z06_RS14030 (L2Z06_14030) | - | 2924394..2925392 (+) | 999 | WP_001077405.1 | adenosine deaminase | - |
| L2Z06_RS14035 (L2Z06_14035) | - | 2925436..2925993 (-) | 558 | WP_001111760.1 | cytochrome b | - |
| L2Z06_RS14040 (L2Z06_14040) | - | 2926232..2926621 (+) | 390 | WP_000735756.1 | hypothetical protein | - |
| L2Z06_RS14045 (L2Z06_14045) | rnhB | 2926687..2927253 (+) | 567 | WP_000495836.1 | ribonuclease HII | - |
| L2Z06_RS14050 (L2Z06_14050) | csrA | 2927323..2927577 (-) | 255 | WP_000906487.1 | carbon storage regulator CsrA | - |
| L2Z06_RS14055 (L2Z06_14055) | - | 2927824..2929104 (-) | 1281 | WP_001185176.1 | aspartate kinase | - |
| L2Z06_RS14060 (L2Z06_14060) | alaS | 2929170..2931806 (-) | 2637 | WP_000199457.1 | alanine--tRNA ligase | - |
| L2Z06_RS14065 (L2Z06_14065) | gap | 2932076..2933101 (+) | 1026 | WP_001188823.1 | type I glyceraldehyde-3-phosphate dehydrogenase | - |
| L2Z06_RS14070 (L2Z06_14070) | - | 2933377..2934543 (+) | 1167 | WP_000155680.1 | ATP phosphoribosyltransferase regulatory subunit | - |
| L2Z06_RS14075 (L2Z06_14075) | - | 2934608..2935927 (+) | 1320 | WP_000517792.1 | adenylosuccinate synthase | - |
| L2Z06_RS14080 (L2Z06_14080) | - | 2936050..2936367 (+) | 318 | WP_000776215.1 | hypothetical protein | - |
| L2Z06_RS14085 (L2Z06_14085) | - | 2936484..2937263 (+) | 780 | WP_001034598.1 | M48 family metallopeptidase | - |
| L2Z06_RS14090 (L2Z06_14090) | - | 2937323..2938372 (-) | 1050 | WP_001159802.1 | NADP(H)-dependent aldo-keto reductase | - |
| L2Z06_RS14100 (L2Z06_14100) | crp | 2939764..2940429 (-) | 666 | WP_000203219.1 | cAMP-activated global transcriptional regulator CRP | Regulator |
| L2Z06_RS14105 (L2Z06_14105) | - | 2940670..2940789 (+) | 120 | Protein_2724 | hypothetical protein | - |
| L2Z06_RS14110 (L2Z06_14110) | - | 2940868..2941290 (+) | 423 | WP_001195082.1 | OsmC family protein | - |
| L2Z06_RS14115 (L2Z06_14115) | - | 2941382..2941807 (+) | 426 | WP_001026230.1 | GNAT family N-acetyltransferase | - |
| L2Z06_RS14120 (L2Z06_14120) | - | 2941804..2942610 (-) | 807 | WP_001237344.1 | peptidoglycan DD-metalloendopeptidase family protein | - |
Sequence
Protein
Download Length: 221 a.a. Molecular weight: 24956.78 Da Isoelectric Point: 8.1128
>NTDB_id=650658 L2Z06_RS14100 WP_000203219.1 2939764..2940429(-) (crp) [Acinetobacter baumannii strain AB167-VUB]
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFLCTR
MTSNFSQLSTDALSPGQLPESVKALLKRAHINRYPKRTTIVDAGTESKSLYLILKGSVSIILREDDEREIVVAYLNPGDF
FGEMGLFEPNPQRTAEVRTRDVCEIAEISYDNFHELSKQYPDLSYAVFAQLVRRLKNTTRKMTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEDQGMIQTDGKAILIFLCTR
Nucleotide
Download Length: 666 bp
>NTDB_id=650658 L2Z06_RS14100 WP_000203219.1 2939764..2940429(-) (crp) [Acinetobacter baumannii strain AB167-VUB]
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGCCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTCTCTGTACACGATAA
ATGACTTCAAATTTTTCACAACTCAGCACAGATGCTTTATCTCCGGGGCAACTACCTGAATCCGTTAAAGCATTGTTAAA
ACGTGCTCACATCAACAGATATCCAAAACGAACCACAATTGTTGATGCCGGAACAGAGTCAAAATCTTTATATTTAATTT
TAAAAGGCTCAGTTTCAATTATTTTACGTGAAGACGATGAACGTGAAATTGTTGTGGCATATTTGAATCCTGGTGACTTC
TTTGGGGAAATGGGGCTTTTCGAACCGAACCCTCAACGTACAGCTGAAGTTCGTACCCGTGATGTCTGTGAAATTGCGGA
AATTTCATATGACAACTTCCACGAACTGAGCAAACAGTATCCAGATCTCAGCTATGCCGTTTTCGCGCAACTCGTTCGTC
GTTTAAAAAATACAACTCGTAAAATGACCGATCTTGCATTTATTGATGTGTCAGGCCGTATTGCGCGTTGCTTAATCGAC
CTATCTTCACAACCAGAAGCAATGATCTTGCCGAATGGCCGTCAAATTCGTATTACTCGACAAGAGATTGGACGCATTGT
CGGGTGTTCACGAGAAATGGTTGGCCGTGTATTAAAGACCTTAGAAGATCAAGGTATGATTCAAACTGACGGTAAAGCTA
TTCTAATTTTTCTCTGTACACGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| crp | Acinetobacter baumannii D1279779 |
100 |
98.19 |
0.982 |
| crp | Vibrio cholerae strain A1552 |
47.317 |
92.76 |
0.439 |
| crp | Haemophilus influenzae Rd KW20 |
48.705 |
87.33 |
0.425 |