Detailed information NTG0650528

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG996_RS30110
• Genome accession: NZ_CP107971
• Coordinates: 6560909..6562198 (+)
• Length: 429 a.a.
• NCBI ID: WP_266514322.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00366
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 6555909..6567198

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG996_RS30080 (OG996_30070)	-	6556862..6557083 (+)	222	Protein_5948	cation transporter	-
OG996_RS30095 (OG996_30085)	tig	6557702..6559099 (+)	1398	WP_266514325.1	trigger factor	-
OG996_RS30100 (OG996_30090)	clpP	6559380..6560000 (+)	621	WP_323178394.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG996_RS30105 (OG996_30095)	clpP	6560050..6560730 (+)	681	WP_323178393.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG996_RS30110 (OG996_30100)	clpX	6560909..6562198 (+)	1290	WP_266514322.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG996_RS30115 (OG996_30105)	-	6562443..6563405 (-)	963	WP_266514319.1	hypothetical protein	-
OG996_RS30120 (OG996_30110)	-	6563543..6566167 (+)	2625	WP_266514315.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46864.68 Da
• Isoelectric Point: 4.8160

>NTDB_id=650528 OG996_RS30110 WP_266514322.1 6560909..6562198(+) (clpX) [Streptomyces sp. NBC_00366]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGANGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKLELQSKDQFGDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVVT
ADVVHSNVNPTLIPRDARNGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=650528 OG996_RS30110 WP_266514322.1 6560909..6562198(+) (clpX) [Streptomyces sp. NBC_00366]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCTGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GCGAGGTGCGCTGGGAGGAACTGCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCCCTCTCCGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGCCAACGGCCG
TGACGACGCGATCGAGTTGGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCCGGCAAGACCCTCCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTCCCGTTCGCGATCGCGGACGCGACGGCGCTCACGGAGGCGGGTTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCGAGGAAGAGTGAGAACCCCTCGATCACTCGCGACGTGTCGGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACGACGGCCTCGGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGTGCCTTCTCCGGCCTGGAGAAGATCATCGAGTCCCGGGCGGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCTGGAGCTGCAGTCCAAGGACCAGTTCGGGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGTAACGCGCTGGTGAAGCAGTACCAACGTCTCTTCGAACTCGACGGTGT
CGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCCGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGAGTCGTCGTCACA
GCGGACGTCGTCCACTCGAACGTGAACCCGACCCTGATCCCGCGCGACGCGCGGAACGGGCGGGGGCCGGGGGAGCAGAA
GACGGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.706	0.59
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	95.804	0.517