Detailed information NTG0650351

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHT17_RS32630
• Genome accession: NZ_CP107967
• Coordinates: 7103561..7104847 (+)
• Length: 428 a.a.
• NCBI ID: WP_116512991.1
• Uniprot ID: A0ABV4SEI4
• Organism: Streptomyces sp. NBC_00371
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7098561..7109847

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHT17_RS32600 (OHT17_32625)	-	7099700..7099894 (+)	195	WP_100594330.1	hypothetical protein	-
OHT17_RS32615 (OHT17_32640)	tig	7100411..7101799 (+)	1389	WP_266564251.1	trigger factor	-
OHT17_RS32620 (OHT17_32645)	clpP	7102084..7102692 (+)	609	WP_266569404.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT17_RS32625 (OHT17_32650)	clpP	7102746..7103405 (+)	660	WP_227294656.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHT17_RS32630 (OHT17_32655)	clpX	7103561..7104847 (+)	1287	WP_116512991.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHT17_RS32635 (OHT17_32660)	-	7104929..7105903 (-)	975	WP_326713021.1	hypothetical protein	-
OHT17_RS32640 (OHT17_32665)	-	7106089..7108719 (+)	2631	WP_326713022.1	valine--tRNA ligase	-
OHT17_RS32645 (OHT17_32670)	-	7108845..7109483 (-)	639	WP_327577621.1	hypothetical protein	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46850.55 Da
• Isoelectric Point: 4.7856

>NTDB_id=650351 OHT17_RS32630 WP_116512991.1 7103561..7104847(+) (clpX) [Streptomyces sp. NBC_00371]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELSKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIHSKRELEEKDQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILLEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRRTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
AEAVHSNVNPTLIPRDVRGSGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=650351 OHT17_RS32630 WP_116512991.1 7103561..7104847(+) (clpX) [Streptomyces sp. NBC_00371]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAAGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAAGAACTTCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAAGGCTATGTCGTCGGCCAGGAGGCC
GCGAAGAAAGCCCTCTCGGTCGCTGTGTACAACCATTACAAGCGGGTTCAGGCCGGTGAGAACGGCGGAGCCCAGGGACG
CGACGACGCGATCGAGCTGTCGAAGTCCAACATCCTGCTCCTGGGCCCCACGGGCTCGGGCAAGACGCTCCTGGCCCAGA
CCCTGGCCCGCATGCTGAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTCACGGAGGCCGGCTATGTGGGCGAGGAC
GTCGAGAACATCCTCCTGAAGCTGATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGATGTGTCCGGTGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTCGAGGGGACCACGGCTTCCGTCCCGCCCCAGGGCGGCCGCAAGCACCCCCATCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCGCCGGCCTGGAGAAGATCATCGAGTCGCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCGACGATCCACTCCAAGCGCGAGCTGGAGGAGAAGGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGTCTCCCCGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCGCTCCTCCAGATCCTCCTGGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCCGCACAGGCGCGCGCGGCCTGC
GTGCGATCATGGAGGAAGTCCTCCAGTCCGTGATGTACGAGGTCCCCTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCAGAGGCCGTCCACTCGAACGTGAACCCGACGCTGATCCCCCGCGACGTCCGCGGCTCGGGCAGCGGAGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.433	93.925	0.596
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.479	96.495	0.526