Detailed information NTG0650109

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG959_RS26115
• Genome accession: NZ_CP107951
• Coordinates: 5837859..5839157 (+)
• Length: 432 a.a.
• NCBI ID: WP_326662250.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00385
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5832859..5844157

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG959_RS26085 (OG959_26095)	-	5833900..5834094 (+)	195	WP_326662244.1	hypothetical protein	-
OG959_RS26100 (OG959_26110)	tig	5834673..5836067 (+)	1395	WP_326662246.1	trigger factor	-
OG959_RS26105 (OG959_26115)	-	5836333..5836938 (+)	606	WP_326666613.1	ATP-dependent Clp protease proteolytic subunit	-
OG959_RS26110 (OG959_26120)	clpP	5837018..5837701 (+)	684	WP_326662248.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG959_RS26115 (OG959_26125)	clpX	5837859..5839157 (+)	1299	WP_326662250.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG959_RS26120 (OG959_26130)	-	5839232..5840230 (-)	999	WP_326662252.1	hypothetical protein	-
OG959_RS26125 (OG959_26135)	-	5840371..5842992 (+)	2622	WP_326662254.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47405.20 Da
• Isoelectric Point: 4.8363

>NTDB_id=650109 OG959_RS26115 WP_326662250.1 5837859..5839157(+) (clpX) [Streptomyces sp. NBC_00385]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGANRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELEFEREALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
SDVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=650109 OG959_RS26115 WP_326662250.1 5837859..5839157(+) (clpX) [Streptomyces sp. NBC_00385]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCGGAGACGA
GCGAGGTCCGCTGGGAGGAACTTCCCAAGCCCCGCGAGATCTACGAGTTCCTCGAGGGATACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCAGGCGAGAACGGCGGCGGCGCGAACCG
CGACGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCGGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAGAACCCGTCGATCACCCGCGATGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTGCCGCCGCAGGGCGGCCGGAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGTCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAATTCATCGGCCGCCTCCCGGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTCATCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGAGTTCGAGCGCGAGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGACTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACC
TCGGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGGACGATCGGCAAGGGCGACGACGGGCG
GCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.93	93.056	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.126	95.37	0.516