Detailed information NTG0649922

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG917_RS11530
• Genome accession: NZ_CP107948
• Coordinates: 2531945..2533237 (-)
• Length: 430 a.a.
• NCBI ID: WP_328317481.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00388
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2526945..2538237

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG917_RS11515 (OG917_11520)	-	2526995..2528008 (+)	1014	WP_328317478.1	rod shape-determining protein	-
OG917_RS11520 (OG917_11525)	-	2528077..2530698 (-)	2622	WP_328317479.1	valine--tRNA ligase	-
OG917_RS11525 (OG917_11530)	-	2530836..2531864 (+)	1029	WP_328317480.1	hypothetical protein	-
OG917_RS11530 (OG917_11535)	clpX	2531945..2533237 (-)	1293	WP_328317481.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG917_RS11535 (OG917_11540)	clpP	2533394..2534077 (-)	684	WP_328317482.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG917_RS11540 (OG917_11545)	clpP	2534129..2534746 (-)	618	WP_328317483.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG917_RS11545 (OG917_11550)	tig	2535024..2536406 (-)	1383	WP_328317484.1	trigger factor	-
OG917_RS11560 (OG917_11565)	-	2537108..2537302 (-)	195	WP_328317485.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47101.89 Da
• Isoelectric Point: 4.8277

>NTDB_id=649922 OG917_RS11530 WP_328317481.1 2531945..2533237(-) (clpX) [Streptomyces sp. NBC_00388]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=649922 OG917_RS11530 WP_328317481.1 2531945..2533237(-) (clpX) [Streptomyces sp. NBC_00388]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATTGAGGAAGAGCTCGCGGAGACCT
CCGAGGTGCGGTGGGAGGAACTGCCCAAACCGCGCGAGATCTATGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGCACCAGCCG
TGAGGACGCGATCGAGCTCGCCAAGTCCAACATCCTTCTGCTGGGCCCGACGGGCTCCGGCAAGACGCTGCTCGCCCAGA
CACTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACCGCGCTCACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGTGATGTCTCCGGCGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAAGGCACCACCGCCTCGGTGCCTCCGCAGGGTGGTCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCGGGTCTGGAGCGCATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGTGCGACCATCCGCTCCAAGCGGGAGATCGAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGGCTCCCCGTGCTGACCTCGGTGCACAACCTGGACCGC
GAAGCACTGCTGCAGATCCTGGTCGAGCCGCGCAACGCACTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGTCCGGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACGGGCGCGCGCGGTCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTTCCGTCGCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGATGTCGTCCGGAACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCGGCAACGACGGACGGCACGA
GAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.772	93.721	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.155	95.814	0.509