Detailed information NTG0649451

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG389_RS12905
• Genome accession: NZ_CP107924
• Coordinates: 2803577..2804863 (-)
• Length: 428 a.a.
• NCBI ID: WP_250739478.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00435
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2798577..2809863

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG389_RS12890 (OG389_12905)	-	2799036..2799617 (+)	582	WP_328298617.1	vitamin K epoxide reductase family protein	-
OG389_RS12895 (OG389_12910)	-	2799714..2802335 (-)	2622	WP_328298618.1	valine--tRNA ligase	-
OG389_RS12900 (OG389_12915)	-	2802464..2803441 (+)	978	WP_328298619.1	hypothetical protein	-
OG389_RS12905 (OG389_12920)	clpX	2803577..2804863 (-)	1287	WP_250739478.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG389_RS12910 (OG389_12925)	clpP	2805017..2805688 (-)	672	WP_328298620.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG389_RS12915 (OG389_12930)	-	2805775..2806392 (-)	618	WP_254383059.1	ATP-dependent Clp protease proteolytic subunit	-
OG389_RS12920 (OG389_12935)	tig	2806690..2808093 (-)	1404	WP_328298621.1	trigger factor	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46950.82 Da
• Isoelectric Point: 4.8219

>NTDB_id=649451 OG389_RS12905 WP_250739478.1 2803577..2804863(-) (clpX) [Streptomyces sp. NBC_00435]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLESYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASNQFQEVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILIEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
SDVVRSNVNPTLVPRIVPKDQGPHEKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=649451 OG389_RS12905 WP_250739478.1 2803577..2804863(-) (clpX) [Streptomyces sp. NBC_00435]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGACCCGGTGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAAGAGGAACTCGCGGAGACCT
CCGAGGTTCGCTGGGAAGAACTTCCCAAGCCCCGTGAGATCTACGAGTTCCTGGAGAGCTACGTCGTCGGCCAGGAGCCG
GCGAAGAAGGCGCTCTCCGTCGCTGTGTACAACCATTACAAGCGCGTCCAGGCCGGCGAGAACGGCGGCGGGACGGGCCG
GGACGACGCGATCGAGCTCGCGAAGTCCAACATCCTGCTGCTGGGCCCCACGGGCTCGGGCAAGACGCTGCTGGCCCAGA
CGCTCGCCCGCATGCTCAACGTCCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCTGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTGAGCGGTGAGGGCGTGCAGCAGGCCC
TCCTGAAGATCCTGGAAGGCACCACCGCTTCCGTACCGCCGCAGGGCGGTCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGCGCCTTCTCCGGCCTGGAGCGGATCATCGAGTCCCGCGCCGGCGC
CAAGGGCATCGGCTTCGGGGCGACCATCCGCTCGAAGCGTGAGATCGAGGCGAGCAACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTGCCCGTCATCACCTCGGTGCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCATCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGTGT
GGAGCTGGACTTCGAGCGCGAGGCGCTGGAGGCCATCGCGGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAAGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACC
TCGGACGTCGTCCGTTCCAACGTCAACCCGACGCTGGTCCCGCGGATCGTCCCGAAGGACCAGGGGCCGCACGAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.925	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519