Detailed information NTG0649377

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHB13_RS11185
• Genome accession: NZ_CP107921
• Coordinates: 2516497..2517789 (-)
• Length: 430 a.a.
• NCBI ID: WP_266857025.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00440
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 2511497..2522789

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB13_RS11170 (OHB13_11180)	-	2511499..2512512 (+)	1014	WP_328376946.1	rod shape-determining protein	-
OHB13_RS11175 (OHB13_11185)	-	2512579..2515200 (-)	2622	WP_328376947.1	valine--tRNA ligase	-
OHB13_RS11180 (OHB13_11190)	-	2515339..2516376 (+)	1038	WP_266857027.1	hypothetical protein	-
OHB13_RS11185 (OHB13_11195)	clpX	2516497..2517789 (-)	1293	WP_266857025.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHB13_RS11190 (OHB13_11200)	clpP	2517946..2518629 (-)	684	WP_164261167.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB13_RS11195 (OHB13_11205)	clpP	2518682..2519299 (-)	618	WP_323183829.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB13_RS11200 (OHB13_11210)	tig	2519582..2520985 (-)	1404	WP_328376948.1	trigger factor	-
OHB13_RS11215 (OHB13_11225)	-	2521591..2521785 (-)	195	WP_164261160.1	hypothetical protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47072.85 Da
• Isoelectric Point: 4.7809

>NTDB_id=649377 OHB13_RS11185 WP_266857025.1 2516497..2517789(-) (clpX) [Streptomyces sp. NBC_00440]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGASREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRDNVNPTLVPREPRIVGNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=649377 OHB13_RS11185 WP_266857025.1 2516497..2517789(-) (clpX) [Streptomyces sp. NBC_00440]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGGAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATTGATCTCTGCAACGAGATCATTGAGGAAGAGCTCGCGGAGACCT
CCGAAGTGCGGTGGGAGGAACTGCCCAAACCGCGCGAGATCTATGAGTTCCTTGAGGGATACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTAGCGGTCTACAACCACTACAAGCGCGTCCAGGCCGGTGAGAACGGCGGCGGCGCCAGCCG
CGAGGACGCGATCGAACTCGCCAAGTCCAACATCCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCCCAGA
CGCTGGCCCGGATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACAGCGCTGACGGAGGCCGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGCATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACCCGTGATGTTTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCGTCGGTGCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACCACGAACGTGCTGTTCATCGTGGGCGGCGCGTTCTCCGGTCTGGAGCGGATCATCGAGTCCCGGGCGGGCGC
GAAGGGCATCGGCTTCGGCGCCACCATCCGCTCCAAGCGGGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCCTGACCTCGGTGCACAACCTGGACCGC
GAGGCGCTGCTGCAGATCCTGGTCGAGCCGCGCAACGCACTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGTGT
GGAGCTGGACTTCGACCGTCCCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCGGCACCGGGGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTGCCGTCCCGCAAGGACGTCGCCCGGGTCGTCATCACG
GCGGACGTCGTCCGGGACAACGTGAACCCGACGCTGGTCCCGCGCGAGCCGCGGATCGTCGGCAACGACGGACGGCACGA
GAAGTCCGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.772	93.721	0.598
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512