Detailed information NTG0649266

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG432_RS22885
• Genome accession: NZ_CP107918
• Coordinates: 5128010..5129302 (+)
• Length: 430 a.a.
• NCBI ID: WP_100579698.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00442
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 5123010..5134302

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG432_RS22850 (OG432_22850)	-	5123434..5123628 (+)	195	WP_267053209.1	hypothetical protein	-
OG432_RS22855 (OG432_22855)	-	5123835..5124140 (+)	306	WP_328312818.1	hypothetical protein	-
OG432_RS22870 (OG432_22870)	tig	5124847..5126235 (+)	1389	WP_328312819.1	trigger factor	-
OG432_RS22875 (OG432_22875)	-	5126489..5127097 (+)	609	WP_100579696.1	ATP-dependent Clp protease proteolytic subunit	-
OG432_RS22880 (OG432_22880)	clpP	5127144..5127833 (+)	690	WP_328315206.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG432_RS22885 (OG432_22885)	clpX	5128010..5129302 (+)	1293	WP_100579698.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG432_RS22890 (OG432_22890)	-	5129380..5130363 (-)	984	WP_328312820.1	hypothetical protein	-
OG432_RS22895 (OG432_22895)	-	5130501..5133125 (+)	2625	WP_328312821.1	valine--tRNA ligase	-
OG432_RS22900 (OG432_22900)	-	5133214..5133780 (-)	567	WP_328312822.1	vitamin K epoxide reductase family protein	-

Sequence

Protein

• Length: 430 a.a.
• Molecular weight: 47086.92 Da
• Isoelectric Point: 4.8824

>NTDB_id=649266 OG432_RS22885 WP_100579698.1 5128010..5129302(+) (clpX) [Streptomyces sp. NBC_00442]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAESSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGTGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLEKIIESRAGAKGIGFGATIRSKREIEASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFDRPALEAIADQAILRGTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRIVKNDGRHEKSA

Nucleotide

• Length: 1293 bp

>NTDB_id=649266 OG432_RS22885 WP_100579698.1 5128010..5129302(+) (clpX) [Streptomyces sp. NBC_00442]
GTGGCACGCATCGGTGACGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCAGGCCCCGGGGTGTACATCTGCGACGAGTGCATCGACCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAGTCCT
CCGAGGTGCGGTGGGAGGAACTTCCCAAGCCGCGCGAGATCTACGAATTCCTTGAGGGCTACGTCGTGGGGCAGGAACCC
GCGAAGAAGGCCCTCTCGGTGGCGGTCTACAACCACTACAAGCGCGTGCAGGCCGGCGAGAACGGCGGCGGCACGGGCCG
CGACGACGCGATCGAGCTCGCCAAGTCCAACATCCTGCTCCTCGGCCCCACCGGCTCCGGCAAGACGCTGCTCGCGCAGA
CCCTGGCGCGCATGCTCAACGTGCCGTTCGCCATCGCCGACGCCACCGCGCTCACCGAGGCGGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGCGACGTCAGCGGCGAAGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACCGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCTCGGGCCTGGAGAAGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGATCGAGGCCAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTGCCCGTCCTGACCTCGGTCCACAACCTCGACCGC
GAAGCGCTCCTGCAGATCCTGGTCGAGCCGCGCAACGCGCTCGTCAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGACCGCCCCGCCCTGGAGGCCATCGCCGACCAGGCCATCCTGCGCGGCACCGGCGCGCGCGGCCTGC
GCGCCATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTCGCCCGCGTCGTCATCACC
GCCGACGTGGTCCGCAACAACGTCAACCCGACGCTGGTCCCGCGCGAGCCGCGCATCGTCAAGAACGACGGGCGGCACGA
GAAGAGCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.682	93.488	0.595
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.398	95.814	0.512