Detailed information NTG0649087

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHA71_RS33475
• Genome accession: NZ_CP107916
• Coordinates: 7269185..7270471 (+)
• Length: 428 a.a.
• NCBI ID: WP_328372359.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00444
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7264185..7275471

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHA71_RS33445 (OHA71_33440)	-	7265187..7265381 (+)	195	WP_210577588.1	hypothetical protein	-
OHA71_RS33460 (OHA71_33455)	tig	7265909..7267303 (+)	1395	WP_328440665.1	trigger factor	-
OHA71_RS33465 (OHA71_33460)	clpP	7267654..7268268 (+)	615	WP_328364492.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA71_RS33470 (OHA71_33465)	clpP	7268320..7269000 (+)	681	WP_328364494.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHA71_RS33475 (OHA71_33470)	clpX	7269185..7270471 (+)	1287	WP_328372359.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHA71_RS33480 (OHA71_33475)	-	7270548..7271534 (-)	987	WP_328440666.1	hypothetical protein	-
OHA71_RS33485 (OHA71_33480)	-	7271671..7274295 (+)	2625	WP_328440667.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46837.60 Da
• Isoelectric Point: 4.7866

>NTDB_id=649087 OHA71_RS33475 WP_328372359.1 7269185..7270471(+) (clpX) [Streptomyces sp. NBC_00444]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQSREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQGVMYEIPSRKDVARVVIT
AEVVHSNVNPTLIPRDARGRGSGEQKSA

Nucleotide

• Length: 1287 bp

>NTDB_id=649087 OHA71_RS33475 WP_328372359.1 7269185..7270471(+) (clpX) [Streptomyces sp. NBC_00444]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAAACCA
GCGAGGTGCGCTGGGAGGAACTCCCCAAACCGCGCGAGATCTACGAGTTCCTCGAGGGCTATGTGGTCGGCCAGGAGGCT
GCCAAGAAGGCGCTCTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGCCCAAAGCCG
CGAGGACGCCATCGAGTTGGCGAAGTCCAACATCCTGCTGCTCGGCCCCACGGGCTCCGGCAAGACCCTGCTGGCCCAGA
CCCTCGCGCGCATGCTCAACGTTCCGTTCGCCATCGCCGACGCGACGGCGCTGACGGAGGCCGGGTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTCATCCAGGCGGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTGGCCCGCAAGAGCGAGAACCCGTCGATCACCAGGGATGTGAGCGGCGAGGGCGTCCAGCAGGCGC
TGCTGAAGATCCTGGAAGGCACGACGGCCTCCGTGCCTCCGCAGGGTGGGCGCAAGCACCCCCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCCGGACTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
GAAGGGCATCGGCTTCGGCGCGACGATCCGCTCGAAGCGGGAACTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCGG
AGGACCTGGTCAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCATCACGAGCGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCCCTGGTGAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAACTCGACTTCGAACGCGAGGCCCTCGAAGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGGGGTGATGTACGAGATCCCGTCCCGCAAGGACGTAGCCCGCGTCGTCATCACC
GCCGAGGTCGTCCACTCGAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGAGGGCGGGGCTCGGGCGAGCAGAAGTC
GGCGTAG

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-396)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.925	0.593
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	96.028	0.526