Detailed information NTG0648641

Bioinformatically predicted

Overview

• Name: rpoS
• Type: Regulator
• Locus tag: OG828_RS41150
• Genome accession: NZ_CP107905
• Coordinates: 8994257..8995249 (-)
• Length: 330 a.a.
• NCBI ID: WP_328504017.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00457
• Function: regulation of chitinases (predicted from homology) Competence regulation

Genomic Context

Location: 8989257..9000249

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG828_RS41115 (OG828_41085)	-	8990144..8990713 (-)	570	WP_328368617.1	DNA primase	-
OG828_RS41120 (OG828_41090)	-	8990710..8990973 (-)	264	WP_328441673.1	gas vesicle protein GvpG	-
OG828_RS41125 (OG828_41095)	-	8990984..8991733 (-)	750	WP_328504013.1	GvpL/GvpF family gas vesicle protein	-
OG828_RS41130 (OG828_41100)	-	8991730..8992176 (-)	447	WP_328441675.1	gas vesicle structural protein GvpA	-
OG828_RS41135 (OG828_41105)	gvpO	8992223..8992510 (-)	288	WP_328504014.1	gas vesicle protein GvpO	-
OG828_RS41140 (OG828_41110)	-	8992825..8993202 (+)	378	WP_328504015.1	DUF6479 family protein	-
OG828_RS41145 (OG828_41115)	-	8993251..8994141 (-)	891	WP_328504016.1	SDR family oxidoreductase	-
OG828_RS41150 (OG828_41120)	rpoS	8994257..8995249 (-)	993	WP_328504017.1	sigma-70 family RNA polymerase sigma factor	Regulator
OG828_RS41155 (OG828_41125)	-	8995368..8996816 (-)	1449	WP_328504018.1	FAD-dependent oxidoreductase	-
OG828_RS41160 (OG828_41130)	-	8996823..8998058 (-)	1236	WP_328441679.1	polysaccharide pyruvyl transferase family protein	-
OG828_RS41165 (OG828_41135)	-	8998229..8998558 (-)	330	Protein_8141	glycosyltransferase family 2 protein	-
OG828_RS41170 (OG828_41140)	-	8998821..8999384 (+)	564	WP_328504019.1	hemerythrin domain-containing protein	-
OG828_RS41175 (OG828_41145)	-	8999447..8999649 (+)	203	Protein_8143	MFS transporter	-

Sequence

Protein

• Length: 330 a.a.
• Molecular weight: 37217.38 Da
• Isoelectric Point: 8.5472

>NTDB_id=648641 OG828_RS41150 WP_328504017.1 8994257..8995249(-) (rpoS) [Streptomyces sp. NBC_00457]
MEPRVSRRASTRTARSRGRVPEPDEEPDLLGQYLAQIAATPLLTAEDEVRLAQRIEAGVRAAEELREADAGERDLAPELR
RELDAVARDGKAAKDHMIRANLRLVVAMAKRHAHRGVPLLDVIQEGNLGLIRAVEKFDHTKGFKFSTYATWWIRQAIERG
LAQHARTVRLPMHVVEELRKLGKIERRLQLDLGREPTAEEVARESGFAESRVDWLRRVGRHAVSLDTPVDETGETVIGDL
IPDTEVLQAADIAEYQALAQDLRRAIGTLAPREAMILSLRYGLHDGEQRTLEQVARHVGLTRERVRQLEKQSLARLRAPE
TGQRLLTWAS

Nucleotide

• Length: 993 bp

>NTDB_id=648641 OG828_RS41150 WP_328504017.1 8994257..8995249(-) (rpoS) [Streptomyces sp. NBC_00457]
ATGGAACCCCGAGTGAGCCGCCGCGCCTCCACACGCACCGCACGCTCGCGCGGCCGGGTCCCCGAACCCGACGAGGAACC
GGATCTGCTCGGCCAGTACCTGGCCCAGATCGCGGCGACCCCACTGCTCACCGCGGAGGACGAGGTACGGCTGGCCCAGC
GCATCGAGGCGGGAGTGCGGGCCGCCGAGGAGCTGCGGGAGGCCGACGCCGGCGAGCGCGATCTGGCGCCGGAGCTGCGC
CGGGAACTCGACGCTGTCGCCCGCGACGGCAAGGCCGCCAAGGACCACATGATCCGGGCCAACCTCCGGCTCGTGGTGGC
GATGGCCAAGCGGCACGCCCACCGGGGTGTGCCCCTGCTCGACGTCATCCAGGAGGGCAACCTGGGGCTGATCCGGGCGG
TGGAGAAGTTCGACCACACCAAGGGCTTCAAGTTCTCCACGTACGCGACCTGGTGGATCCGCCAGGCGATCGAGCGGGGC
CTCGCCCAGCACGCCCGGACCGTACGGCTGCCGATGCACGTGGTGGAGGAGCTGCGGAAGCTCGGCAAGATCGAACGGCG
CCTGCAGCTCGACCTGGGCCGTGAGCCCACCGCCGAGGAGGTCGCCCGGGAGAGCGGCTTCGCTGAGTCCCGGGTCGACT
GGCTGCGCCGCGTCGGGCGGCACGCGGTCAGCCTGGACACGCCGGTCGACGAAACCGGTGAGACGGTGATCGGCGACCTC
ATCCCCGACACCGAGGTGCTGCAGGCCGCGGACATCGCCGAGTACCAGGCTCTGGCGCAGGACCTGCGGAGGGCCATCGG
CACCCTCGCGCCCCGCGAGGCCATGATCCTCAGCCTCCGCTACGGCCTGCACGACGGAGAGCAGCGCACCCTCGAACAGG
TCGCACGGCACGTGGGCCTCACCCGCGAGCGCGTACGCCAGCTGGAGAAGCAGTCCCTGGCGAGGCTACGGGCCCCCGAG
ACGGGACAGCGCCTGCTGACGTGGGCGAGCTGA

Domains

Predicted by InterProScan.

• Sigma-70, region 4 (Sigma70_r4) (265-318)

• Sigma-70 region 3 (Sigma70_r3) (176-250)

• Sigma-70 factor, region 1.2 (Sigma70_r1_2) (28-60)

• Sigma-70 region 2 (Sigma70_r2) (97-166)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rpoS	Vibrio cholerae O1 biovar El Tor strain E7946	41.869	87.576	0.367