Detailed information NTG0648149

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: L1776_RS04720
• Genome accession: NZ_CP091174
• Coordinates: 1040870..1042207 (-)
• Length: 445 a.a.
• NCBI ID: WP_236451654.1
• Uniprot ID: -
• Organism: Stutzerimonas stutzeri strain XX1
• Function: regulate pilin expression (predicted from homology) Competence regulation

Genomic Context

Location: 1035870..1047207

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L1776_RS04710	-	1037955..1039550 (-)	1596	WP_014597755.1	response regulator	-
L1776_RS04715	-	1039768..1040826 (+)	1059	WP_011914666.1	DUF2333 family protein	-
L1776_RS04720	pilR	1040870..1042207 (-)	1338	WP_236451654.1	sigma-54-dependent transcriptional regulator	Regulator
L1776_RS04725	pilS	1042338..1043930 (-)	1593	WP_013984075.1	sensor histidine kinase	Regulator
L1776_RS04730	-	1043920..1044153 (-)	234	WP_013984074.1	PP0621 family protein	-
L1776_RS04735	-	1044275..1045264 (-)	990	WP_048329921.1	outer membrane protein assembly factor BamD	-
L1776_RS04740	rluD	1045469..1046443 (+)	975	WP_011914661.1	23S rRNA pseudouridine(1911/1915/1917) synthase RluD	-
L1776_RS04745	pgeF	1046440..1047177 (+)	738	WP_045159695.1	peptidoglycan editing factor PgeF	-

Sequence

Protein

• Length: 445 a.a.
• Molecular weight: 49572.11 Da
• Isoelectric Point: 6.4140

>NTDB_id=648149 L1776_RS04720 WP_236451654.1 1040870..1042207(-) (pilR) [Stutzerimonas stutzeri strain XX1]
MTARQKALIIDDEPDIRELLEITLGRMKLDTRSARNLKEARELLAREHYDLCLTDMRLPDGSGLELVQHIQQQYPQLPVA
MITAYGSLDTAIGALKAGAFDFLTKPVDLNRLRELVSTALRLRAPAAEAPVDSRLLGSSPPMKTLRKQIGKLARSQAPIY
ISGESGSGKELVARLIHEQGPRSEKPFVPVNCGAIPSELMESEFFGHKKGSFSGAIEDKPGLFQAANGGTLFLDEVADLP
LPMQVKLLRAIQEKAVRAVGGAQEVMVDVRILCATHKDLASEVAAGRFRQDLYYRLNVIELRVPPLRERREDIGLLADVM
LRRLAQECGEATARLHPDALAKLENYRFPGNVRELENMLERAYTLCEGDEIKAGDLRLADSPGLPENGEASLAQIDNLED
HLEEIERKLIMQALEETRWNRTAAAQRLGLTFRSMRYRLKKLGLD

Nucleotide

• Length: 1338 bp

>NTDB_id=648149 L1776_RS04720 WP_236451654.1 1040870..1042207(-) (pilR) [Stutzerimonas stutzeri strain XX1]
ATGACCGCGCGCCAGAAAGCCCTGATCATCGACGACGAGCCGGACATCCGCGAGCTGCTGGAGATCACCCTCGGCCGCAT
GAAGCTCGATACCCGCAGCGCACGCAACCTCAAAGAGGCGCGCGAGCTGCTGGCACGCGAGCACTACGACCTGTGCCTGA
CCGATATGCGCCTGCCCGACGGCAGTGGCCTTGAGCTGGTCCAGCACATCCAGCAACAGTACCCGCAACTGCCCGTGGCG
ATGATCACCGCCTATGGCAGCCTGGATACCGCCATCGGTGCACTCAAGGCCGGTGCGTTCGACTTCCTCACCAAACCGGT
GGACCTGAACCGCCTGCGCGAGCTGGTCAGTACCGCCCTGCGCCTGCGCGCGCCCGCAGCCGAAGCGCCGGTGGACAGTC
GCCTGCTGGGCAGCTCGCCGCCGATGAAAACCTTGCGCAAGCAGATCGGCAAGCTCGCCCGCAGCCAGGCACCCATCTAC
ATCAGCGGCGAGTCGGGCAGCGGCAAGGAACTGGTGGCACGCCTGATTCACGAGCAGGGCCCGCGCAGCGAAAAGCCATT
CGTGCCGGTCAACTGCGGTGCCATTCCGTCGGAGCTGATGGAAAGCGAGTTCTTCGGCCACAAGAAAGGCAGCTTCAGCG
GCGCCATCGAGGACAAGCCCGGCCTGTTCCAGGCCGCCAACGGTGGCACGCTGTTTCTCGACGAGGTGGCGGACCTGCCG
CTGCCGATGCAGGTCAAGCTGCTGCGCGCCATCCAGGAAAAGGCCGTGCGTGCCGTTGGCGGTGCGCAGGAAGTGATGGT
CGATGTACGCATCCTCTGTGCCACCCACAAGGATCTCGCCAGCGAGGTCGCCGCAGGCCGTTTTCGCCAGGATCTCTACT
ACCGCCTGAATGTCATCGAACTGCGTGTACCGCCACTACGCGAACGCCGGGAAGACATCGGCCTGCTCGCCGATGTCATG
CTGCGCCGTCTGGCGCAGGAATGCGGCGAGGCCACGGCCCGCCTGCATCCCGATGCCCTGGCCAAGCTGGAGAACTATCG
CTTTCCGGGCAACGTCCGCGAGCTGGAGAACATGCTCGAACGCGCCTACACCCTGTGCGAAGGCGACGAGATCAAGGCTG
GCGACCTGCGCCTGGCGGATAGCCCCGGCCTGCCGGAAAACGGCGAAGCCAGCCTGGCGCAGATCGACAACCTGGAGGAC
CACCTGGAGGAGATCGAGCGCAAGCTGATCATGCAGGCCCTCGAAGAAACACGCTGGAACCGCACCGCGGCCGCCCAACG
ACTGGGGCTGACCTTCCGCTCGATGCGTTACCGTCTGAAGAAACTCGGCCTGGACTAA

Domains

Predicted by InterproScan.

• Response regulator receiver domain (Response_reg) (8-116)

• Bacterial regulatory protein, Fis family (HTH_8) (402-442)

• Sigma-54 interaction domain (Sigma54_activat) (136-301)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Pseudomonas aeruginosa PAK	85.36	99.775	0.852
pilR	Acinetobacter baumannii strain A118	50.327	100	0.519
luxO	Vibrio cholerae strain A1552	38.341	100	0.384