Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   SCAZ3_RS07520 Genome accession   NZ_AIDX01000001
Coordinates   1559518..1560327 (+) Length   269 a.a.
NCBI ID   WP_003047202.1    Uniprot ID   A0A2D4DNS0
Organism   Streptococcus canis FSL Z3-227     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 1554518..1565327
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCAZ3_RS07495 (SCAZ3_02970) - 1554702..1555412 (+) 711 WP_003047191.1 MIP/aquaporin family protein -
  SCAZ3_RS12010 (SCAZ3_02980) - 1555808..1556077 (+) 270 WP_003047194.1 hypothetical protein -
  SCAZ3_RS07505 (SCAZ3_02985) - 1556286..1557281 (+) 996 WP_003047196.1 DUF3114 domain-containing protein -
  SCAZ3_RS07510 (SCAZ3_02990) vicR 1557459..1558169 (+) 711 WP_003047198.1 response regulator YycF Regulator
  SCAZ3_RS07515 (SCAZ3_02995) vicK 1558162..1559514 (+) 1353 WP_003047200.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SCAZ3_RS07520 (SCAZ3_03000) vicX 1559518..1560327 (+) 810 WP_003047202.1 MBL fold metallo-hydrolase Regulator
  SCAZ3_RS07525 (SCAZ3_03005) rnc 1560429..1561121 (+) 693 WP_003047203.1 ribonuclease III -
  SCAZ3_RS07530 (SCAZ3_03010) smc 1561122..1564667 (+) 3546 WP_003047206.1 chromosome segregation protein SMC -

Sequence

Protein


Download         Length: 269 a.a.        Molecular weight: 30125.32 Da        Isoelectric Point: 6.0739

>NTDB_id=64798 SCAZ3_RS07520 WP_003047202.1 1559518..1560327(+) (vicX) [Streptococcus canis FSL Z3-227]
MIESGFKYSILASGSTGNCFYLETPKKRLLIDAGLTGKKITSLLAEIDRKPEDLDAILITHEHSDHIKGVGVMARKYHLD
VYANEKTWQLMDERNMLGKLDASQKHIFQRDKMLTFGDVDIESFGVSHDAVDPQFYRIMKDNKSFVMLTDTGYVSDRMTG
IIENADGYLIESNHDIEILRSGSYPWSLKQRILSDLGHLSNEDGAGAMIRSLGHKTKKIYLGHLSKENNIKELAHMTMVN
QLAMADLGVGTDFTVHDTSPDTACPLTDI

Nucleotide


Download         Length: 810 bp        

>NTDB_id=64798 SCAZ3_RS07520 WP_003047202.1 1559518..1560327(+) (vicX) [Streptococcus canis FSL Z3-227]
ATGATTGAAAGCGGTTTTAAATATAGTATTTTGGCATCTGGCTCCACAGGCAATTGTTTTTATTTAGAAACACCTAAAAA
GCGCTTATTAATTGACGCGGGGTTGACTGGTAAGAAAATCACCAGTCTCCTTGCTGAAATTGACCGCAAGCCTGAAGATT
TAGATGCTATTTTGATTACCCATGAGCACTCTGACCATATTAAGGGAGTGGGGGTCATGGCTCGTAAATACCATTTGGAC
GTCTATGCCAATGAAAAAACGTGGCAGTTGATGGATGAGCGCAATATGCTAGGAAAGCTTGATGCCTCACAAAAACATAT
TTTCCAAAGAGATAAGATGTTGACCTTTGGAGATGTTGACATTGAAAGTTTTGGGGTTAGCCATGATGCTGTTGATCCCC
AGTTTTACCGTATCATGAAAGACAACAAATCGTTTGTAATGCTGACTGATACAGGTTATGTTAGCGATCGAATGACAGGT
ATTATTGAAAATGCAGATGGTTACTTGATTGAGTCCAATCATGACATTGAAATTTTGCGGTCGGGTTCTTACCCTTGGAG
TTTAAAACAACGCATTTTGTCAGATCTGGGCCATTTGTCAAATGAAGATGGTGCTGGGGCCATGATTAGAAGCTTGGGGC
ATAAGACGAAAAAAATCTATTTGGGCCATTTGAGTAAAGAAAATAACATCAAAGAGCTGGCTCACATGACCATGGTTAAC
CAATTAGCCATGGCAGACTTGGGAGTTGGAACAGATTTTACGGTTCATGACACTTCCCCAGATACGGCCTGTCCCTTGAC
GGATATTTAA

Domains

Predicted by InterproScan.

Beta-lactamase superfamily domain (Lactamase_B_2)

(28-216)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A2D4DNS0

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

76.208

100

0.762

Multiple sequence alignment