Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicK   Type   Regulator
Locus tag   SCAZ3_RS07515 Genome accession   NZ_AIDX01000001
Coordinates   1558162..1559514 (+) Length   450 a.a.
NCBI ID   WP_003047200.1    Uniprot ID   A0AAV3FQK4
Organism   Streptococcus canis FSL Z3-227     
Function   repress comCDE expression; repress comX expression (predicted from homology)   
Competence regulation

Genomic Context

Location: 1553162..1564514
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCAZ3_RS07485 (SCAZ3_02960) dhaL 1553739..1554314 (+) 576 WP_003047186.1 dihydroxyacetone kinase subunit DhaL -
  SCAZ3_RS07490 (SCAZ3_02965) dhaM 1554314..1554688 (+) 375 WP_003047188.1 dihydroxyacetone kinase phosphoryl donor subunit DhaM -
  SCAZ3_RS07495 (SCAZ3_02970) - 1554702..1555412 (+) 711 WP_003047191.1 MIP/aquaporin family protein -
  SCAZ3_RS12010 (SCAZ3_02980) - 1555808..1556077 (+) 270 WP_003047194.1 hypothetical protein -
  SCAZ3_RS07505 (SCAZ3_02985) - 1556286..1557281 (+) 996 WP_003047196.1 DUF3114 domain-containing protein -
  SCAZ3_RS07510 (SCAZ3_02990) vicR 1557459..1558169 (+) 711 WP_003047198.1 response regulator YycF Regulator
  SCAZ3_RS07515 (SCAZ3_02995) vicK 1558162..1559514 (+) 1353 WP_003047200.1 cell wall metabolism sensor histidine kinase VicK Regulator
  SCAZ3_RS07520 (SCAZ3_03000) vicX 1559518..1560327 (+) 810 WP_003047202.1 MBL fold metallo-hydrolase Regulator
  SCAZ3_RS07525 (SCAZ3_03005) rnc 1560429..1561121 (+) 693 WP_003047203.1 ribonuclease III -

Sequence

Protein


Download         Length: 450 a.a.        Molecular weight: 51462.98 Da        Isoelectric Point: 5.4007

>NTDB_id=64797 SCAZ3_RS07515 WP_003047200.1 1558162..1559514(+) (vicK) [Streptococcus canis FSL Z3-227]
MTRDIIGNLSAFELAILLLLVFVAFYFIHLAVRDYRNARIIRMMSHKIRDLINGRYTDMINEKADIELMELADQLNDLSD
VFRLTHENLAQEKNRLASILAYMSDGVLATDRSGKIIMINETARKQLNLTKEQALEKNITDLLEGDTPYTYRELVSKTPV
VTVNSRNDMGEFVTLRLRFALNRRESGFISGLVVVLHDTTEQEKEERERRLFVSNVSHELRTPLTSVKSYLEALDEGALT
EDIAPSFIKVSLDETNRMMRMISDLLNLSRIDNQVTQLSVEMTNFTAFMTSILNRFDLVKNQHTGTGKVYEIVRDYPITS
VWLEIDNDKMTQVIENILNNAIKYSPDGGKITVRMKTTDTQLIISISDQGLGIPKKDLPLIFDRFYRVDKARSRAQGGTG
LGLAIAKEIIKQHHGFIWAKSDYGKGSTFTIVLPYEKDAAIYEEWEEDID

Nucleotide


Download         Length: 1353 bp        

>NTDB_id=64797 SCAZ3_RS07515 WP_003047200.1 1558162..1559514(+) (vicK) [Streptococcus canis FSL Z3-227]
ATGACTAGAGATATCATCGGGAATTTATCCGCTTTTGAATTAGCGATTCTCTTATTGCTTGTTTTTGTTGCCTTTTACTT
TATTCATTTAGCAGTGCGGGATTACCGCAATGCTCGTATTATTCGAATGATGAGCCACAAGATCAGGGATCTGATCAATG
GTCGTTATACCGATATGATTAACGAAAAGGCTGACATTGAATTGATGGAATTGGCAGATCAATTAAACGATCTTTCAGAT
GTTTTTCGCTTAACCCATGAGAATCTTGCCCAGGAAAAAAATCGCTTGGCCAGCATTCTGGCCTATATGTCAGATGGCGT
ACTTGCCACAGACCGTTCTGGGAAAATCATCATGATTAACGAGACTGCCCGCAAGCAGCTTAATCTGACCAAGGAGCAGG
CTCTTGAAAAGAACATTACCGATTTGTTGGAGGGAGATACCCCCTATACCTATCGTGAATTGGTTTCCAAAACGCCTGTT
GTGACGGTCAATAGTCGCAATGACATGGGTGAGTTTGTGACATTACGTTTACGCTTCGCTTTAAACAGACGAGAAAGTGG
TTTTATTTCTGGTTTGGTTGTGGTGCTCCATGACACTACAGAACAGGAAAAGGAAGAACGTGAACGCCGGTTGTTTGTTT
CTAATGTGAGTCATGAGTTGAGAACACCTTTGACATCGGTGAAATCCTACTTGGAGGCTCTTGACGAAGGTGCCCTCACA
GAAGATATTGCGCCAAGCTTTATCAAGGTTTCTCTTGATGAGACCAATCGAATGATGCGAATGATTTCCGATCTTTTGAA
CCTGTCTCGCATTGATAACCAAGTGACCCAGTTGTCAGTCGAAATGACCAATTTCACAGCCTTTATGACCTCTATTCTGA
ACCGATTTGACCTAGTTAAAAACCAACATACGGGTACAGGCAAGGTCTATGAAATTGTGAGGGATTACCCCATTACTTCT
GTTTGGTTAGAAATTGACAATGACAAGATGACACAGGTTATTGAAAATATTCTTAATAATGCCATTAAATATTCTCCTGA
TGGTGGGAAAATCACTGTTCGCATGAAAACAACAGACACGCAGTTGATTATTTCCATTTCTGATCAGGGTCTCGGCATTC
CTAAAAAGGATTTGCCCCTTATTTTTGACCGATTTTACCGTGTGGACAAGGCAAGAAGTCGTGCCCAGGGCGGTACTGGA
CTAGGCCTTGCCATTGCTAAAGAAATTATCAAGCAGCATCACGGCTTCATCTGGGCTAAAAGTGATTATGGCAAGGGATC
AACCTTTACCATTGTCTTGCCTTATGAAAAAGATGCTGCCATTTATGAAGAATGGGAGGAAGATATAGATTAA

Domains

Predicted by InterproScan.

His Kinase A (phospho-acceptor) domain (HisKA)

(209-273)

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c)

(326-436)

PAS fold (PAS)

(95-165)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicK Streptococcus mutans UA159

73.913

92

0.68
  micB Streptococcus pneumoniae Cp1015

66.824

94.444

0.631

Multiple sequence alignment