Detailed information NTG0646652

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG710_RS08445
• Genome accession: NZ_CP107834
• Coordinates: 1895532..1896830 (-)
• Length: 432 a.a.
• NCBI ID: WP_330238755.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00525
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 1890532..1901830

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG710_RS08430 (OG710_08445)	-	1891164..1893785 (-)	2622	WP_330238752.1	valine--tRNA ligase	-
OG710_RS08435 (OG710_08450)	-	1893925..1894908 (+)	984	WP_330238753.1	hypothetical protein	-
OG710_RS08440 (OG710_08455)	-	1894994..1895308 (-)	315	WP_330238754.1	hypothetical protein	-
OG710_RS08445 (OG710_08460)	clpX	1895532..1896830 (-)	1299	WP_330238755.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG710_RS08450 (OG710_08465)	clpP	1896987..1897670 (-)	684	WP_111331670.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG710_RS08455 (OG710_08470)	-	1897750..1898355 (-)	606	WP_185993056.1	ATP-dependent Clp protease proteolytic subunit	-
OG710_RS08460 (OG710_08475)	tig	1898622..1900013 (-)	1392	WP_330238756.1	trigger factor	-
OG710_RS08475 (OG710_08490)	-	1900575..1900769 (-)	195	WP_330238757.1	hypothetical protein	-

Sequence

Protein

• Length: 432 a.a.
• Molecular weight: 47374.15 Da
• Isoelectric Point: 4.8852

>NTDB_id=646652 OG710_RS08445 WP_330238755.1 1895532..1896830(-) (clpX) [Streptomyces sp. NBC_00525]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGGNNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFSGLERIIESRAGAKGIGFGATIRSKREIQASDQFQEVMPEDLVKFGMIPEFIGRLPVLTSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFERGALEAIADQAILRQTGARGLRAIMEEVLQSVMYEVPSRKDVARVVIT
ADVVRNNVNPTLVPREPRTIGKGDDGRHEKSA

Nucleotide

• Length: 1299 bp

>NTDB_id=646652 OG710_RS08445 WP_330238755.1 1895532..1896830(-) (clpX) [Streptomyces sp. NBC_00525]
GTGGCACGCATCGGTGATGGCGGCGACCTGCTCAAGTGCTCGTTCTGCGGAAAGAGCCAGAAGCAGGTGAAGAAGCTCAT
CGCGGGTCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTCCGCTGGGAAGAGCTTCCCAAGCCGCGCGAGATCTACGAGTTCCTCGAGGGGTACGTCGTCGGGCAGGAGCCC
GCGAAGAAGGCCCTCTCGGTCGCTGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGCGGGAACAACCG
CGAGGACGCGATCGAGCTCGCCAAGTCCAACATTCTGCTGCTGGGCCCCACCGGCTCCGGCAAGACTCTCCTCGCGCAGA
CGCTGGCCCGCATGCTCAACGTCCCGTTCGCCATCGCGGACGCGACGGCGCTGACGGAGGCCGGCTACGTCGGCGAGGAC
GTCGAGAACATCCTGCTGAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGCAAGAGCGAGAACCCGTCGATCACGCGAGACGTCTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTCAAGATCCTGGAGGGCACCACCGCCTCCGTACCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCTCCGGCCTGGAGAGGATCATCGAGTCGCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGCGGGAGATCCAGGCGAGCGACCAGTTCCAGGAGGTCATGCCGG
AGGACCTGGTGAAGTTCGGGATGATCCCCGAGTTCATCGGCCGCCTCCCCGTCCTGACCTCGGTCCACAACCTGGACCGC
GAGGCGCTGCTCCAGATCCTCGTCGAGCCGCGCAACGCCCTGGTCAAGCAGTACCAGCGGCTGTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGGCGCGCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCGCGCGGCCTGC
GCGCGATCATGGAGGAGGTCCTCCAGTCGGTGATGTACGAGGTCCCCTCCCGCAAGGACGTCGCCCGCGTGGTGATCACC
GCCGACGTGGTCCGCAACAACGTCAACCCCACCCTGGTCCCGCGCGAGCCGCGCACGATCGGCAAGGGCGACGACGGCCG
CCACGAGAAGTCCGCGTAG

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-311)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	63.184	93.056	0.588
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	53.883	95.37	0.514