Detailed information    

insolico Bioinformatically predicted

Overview


Name   disA   Type   Machinery gene
Locus tag   OHS33_RS16260 Genome accession   NZ_CP107819
Coordinates   3748661..3749785 (+) Length   374 a.a.
NCBI ID   WP_330331123.1    Uniprot ID   -
Organism   Streptomyces sp. NBC_00536     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 3743661..3754785
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OHS33_RS16245 (OHS33_16240) - 3744291..3745139 (+) 849 WP_330331120.1 hypothetical protein -
  OHS33_RS16250 (OHS33_16245) - 3745144..3746916 (-) 1773 WP_330331121.1 hypothetical protein -
  OHS33_RS16255 (OHS33_16250) radA 3747074..3748483 (+) 1410 WP_330331122.1 DNA repair protein RadA Machinery gene
  OHS33_RS16260 (OHS33_16255) disA 3748661..3749785 (+) 1125 WP_330331123.1 DNA integrity scanning diadenylate cyclase DisA Machinery gene
  OHS33_RS16265 (OHS33_16260) - 3749991..3750800 (-) 810 WP_330331124.1 hypothetical protein -
  OHS33_RS16270 (OHS33_16265) - 3750981..3751592 (+) 612 WP_330331125.1 phosphatase PAP2 family protein -
  OHS33_RS16275 (OHS33_16270) - 3751615..3752574 (+) 960 WP_330331126.1 A/G-specific adenine glycosylase -
  OHS33_RS16280 (OHS33_16275) - 3752771..3753331 (+) 561 WP_330331127.1 SigE family RNA polymerase sigma factor -
  OHS33_RS16285 (OHS33_16280) - 3753364..3753981 (+) 618 WP_330331128.1 hypothetical protein -
  OHS33_RS16290 (OHS33_16285) cseB 3754024..3754734 (+) 711 WP_330331129.1 two-component system response regulator CseB -

Sequence


Protein


Download         Length: 374 a.a.        Molecular weight: 40400.22 Da        Isoelectric Point: 4.9472

>NTDB_id=646583 OHS33_RS16260 WP_330331123.1 3748661..3749785(+) (disA) [Streptomyces sp. NBC_00536]
MAAKDGAAASGKSGAGSKQEALMRASLSAVAPGQQLRDGLERILRGNTGGLIVLGMDKSVESMCTGGFVLDVEFTATRLR
ELCKLDGALIVDKDITKILRAGVQLVPDASIPTEETGTRHRTADRVSKQCNFPVVSVSQSMRLIALYVDGERRVLEESGA
ILSRANQALATLERYKLRLDEVAGTLSALEIEDLVTVRDVTAVAQRLEMVRRIATEIAEYVVELGTDGRLLSLQLDELTV
GIEQERELVIRDYVPEPTAKRSRTVDEALAELDSLTHAELLELATVARGLGYTGSPETLDSAVSPRGYRLLAKVPRLPGA
IIERLVEHFGGLQKLLAASVDDLQTVDGVGEARARSVREGLSRLAESSILERYV

Nucleotide


Download         Length: 1125 bp        

>NTDB_id=646583 OHS33_RS16260 WP_330331123.1 3748661..3749785(+) (disA) [Streptomyces sp. NBC_00536]
GTGGCAGCCAAGGACGGGGCAGCAGCATCCGGGAAGTCCGGCGCAGGCAGCAAGCAGGAGGCCCTCATGCGGGCCTCGCT
GAGCGCGGTCGCACCTGGTCAGCAGCTGCGTGACGGCCTGGAGCGGATCCTGCGCGGCAACACGGGCGGTCTGATCGTTC
TCGGTATGGACAAGAGCGTCGAGTCGATGTGCACCGGCGGATTCGTGCTGGACGTGGAGTTCACCGCGACCCGGCTGCGC
GAGCTGTGCAAGCTCGACGGGGCGCTCATCGTCGACAAGGACATCACCAAGATCCTGCGGGCGGGCGTCCAGCTGGTACC
GGACGCGTCGATCCCCACGGAGGAGACGGGCACCCGGCACCGCACCGCGGACCGCGTCTCCAAGCAGTGCAACTTCCCGG
TCGTCTCGGTCTCGCAGTCGATGCGGCTGATCGCGCTGTACGTCGACGGCGAGCGGCGCGTGCTGGAGGAGTCCGGGGCG
ATCCTGTCCCGGGCGAACCAGGCGCTGGCCACGCTGGAGCGGTACAAGCTGCGGCTCGACGAGGTCGCGGGCACGCTGTC
CGCGCTGGAGATCGAGGACCTGGTGACGGTCCGCGACGTCACGGCGGTCGCGCAGCGGCTGGAGATGGTCCGGCGGATCG
CGACCGAGATCGCCGAATACGTGGTGGAACTCGGCACCGACGGGCGGCTGCTGTCGCTCCAGCTGGACGAGCTGACCGTC
GGGATCGAGCAGGAGCGCGAGCTGGTCATCCGGGACTACGTGCCCGAGCCGACGGCGAAGCGTTCCCGCACGGTGGACGA
GGCGCTGGCCGAGCTGGACTCCCTCACCCACGCGGAGCTGCTGGAACTGGCGACGGTGGCGCGGGGGCTGGGGTACACGG
GCTCGCCCGAAACCCTCGACTCGGCGGTGTCGCCCCGCGGGTACCGGCTGCTGGCGAAGGTGCCGAGGCTGCCGGGGGCC
ATCATCGAGCGGCTCGTGGAGCACTTCGGGGGGCTGCAGAAGCTGCTCGCCGCGAGCGTGGACGATCTGCAGACCGTCGA
CGGCGTCGGCGAGGCGCGGGCGCGGTCGGTGCGGGAAGGGCTGTCGCGGCTGGCGGAGTCTTCGATCCTGGAGCGCTACG
TCTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  disA Bacillus subtilis subsp. subtilis str. 168

45.429

96.524

0.438