Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   L0U97_RS03355 Genome accession   NZ_CP090890
Coordinates   699740..700123 (+) Length   127 a.a.
NCBI ID   WP_004640629.1    Uniprot ID   -
Organism   Acinetobacter junii strain WCO-9     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 694740..705123
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L0U97_RS03325 - 695242..695577 (+) 336 WP_004963907.1 DUF2004 domain-containing protein -
  L0U97_RS03330 - 695602..695952 (+) 351 WP_004950548.1 DUF488 domain-containing protein -
  L0U97_RS03335 - 696035..696379 (+) 345 WP_004908748.1 zinc ribbon domain-containing protein YjdM -
  L0U97_RS03340 - 696523..696858 (+) 336 WP_112986178.1 YegP family protein -
  L0U97_RS03345 - 696918..698633 (-) 1716 WP_234856924.1 proline--tRNA ligase -
  L0U97_RS03350 - 698792..699460 (-) 669 WP_004908741.1 hypothetical protein -
  L0U97_RS03355 pilG 699740..700123 (+) 384 WP_004640629.1 twitching motility response regulator PilG Regulator
  L0U97_RS03360 - 700144..700506 (+) 363 WP_004664659.1 response regulator -
  L0U97_RS03365 - 700545..701081 (+) 537 WP_004908738.1 chemotaxis protein CheW -
  L0U97_RS03370 - 701128..703215 (+) 2088 WP_004950560.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14199.33 Da        Isoelectric Point: 4.7278

>NTDB_id=646194 L0U97_RS03355 WP_004640629.1 699740..700123(+) (pilG) [Acinetobacter junii strain WCO-9]
MEDKFQNLKVMVIDDSKTIRRTAETLLQREGCEVITAVDGFEALSKIAEANPDIVFVDIMMPRLDGYQTCALIKNSLNYQ
NIPVIMLSSKDGLFDQAKGRVVGSDEYLTKPFSKDELLSAIRNHVSA

Nucleotide


Download         Length: 384 bp        

>NTDB_id=646194 L0U97_RS03355 WP_004640629.1 699740..700123(+) (pilG) [Acinetobacter junii strain WCO-9]
ATGGAAGATAAATTTCAAAATTTAAAAGTAATGGTGATTGACGATTCTAAAACGATTCGACGTACAGCTGAGACACTGTT
ACAACGCGAAGGTTGTGAGGTGATTACAGCTGTCGATGGTTTTGAAGCATTATCGAAAATTGCGGAAGCAAATCCTGATA
TCGTATTTGTCGATATTATGATGCCTCGTCTAGATGGTTACCAAACCTGTGCATTAATTAAAAACTCTCTAAATTATCAA
AATATTCCAGTAATCATGTTATCAAGCAAAGATGGTTTGTTTGATCAAGCCAAAGGGCGTGTTGTGGGGTCAGATGAATA
TTTAACTAAGCCATTTAGTAAAGATGAGCTGTTAAGTGCGATTCGTAACCACGTAAGCGCATAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

96.85

100

0.969
  vicR Streptococcus mutans UA159

42.735

92.126

0.394
  pilH Synechocystis sp. PCC 6803

41.228

89.764

0.37