Detailed information NTG0646183

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: L0U97_RS01305
• Genome accession: NZ_CP090890
• Coordinates: 276275..277705 (-)
• Length: 476 a.a.
• NCBI ID: WP_234856764.1
• Uniprot ID: -
• Organism: Acinetobacter junii strain WCO-9
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 271275..282705

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L0U97_RS01290	lptG	272317..273387 (+)	1071	WP_005403525.1	LPS export ABC transporter permease LptG	-
L0U97_RS01295	gpmI	273507..275051 (+)	1545	WP_099949328.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
L0U97_RS01300	-	275061..276236 (+)	1176	WP_004917024.1	S41 family peptidase	-
L0U97_RS01305	pilR	276275..277705 (-)	1431	WP_234856764.1	sigma-54-dependent transcriptional regulator	Regulator
L0U97_RS01310	pilS	277728..279293 (-)	1566	WP_168154121.1	sensor histidine kinase	Regulator
L0U97_RS01315	-	279309..279944 (-)	636	WP_004957336.1	response regulator	-
L0U97_RS01320	pbpG	280156..281217 (+)	1062	WP_125297253.1	D-alanyl-D-alanine endopeptidase PBP7/8	-
L0U97_RS01325	-	281382..281995 (+)	614	Protein_248	DUF6915 family protein	-

Sequence

Protein

• Length: 476 a.a.
• Molecular weight: 53478.38 Da
• Isoelectric Point: 5.9948

>NTDB_id=646183 L0U97_RS01305 WP_234856764.1 276275..277705(-) (pilR) [Acinetobacter junii strain WCO-9]
MATKQPLVLLVDDEEDLCLLMQMTLARMGIKTHLAYRVEQAKKFFTEFQYDACLTDLNLPDGNGLDLVKHVTQNYPNTPI
AVLTAYGNMDIAIAALKAGAFDFVSKPVNQTHLDQLIQKALNRPQPEQEAVETALENKLLIGRSAPIQQLRIALKKIARS
QAPVFITGESGTGKEVVANLVHRLSNRSEGPFIAINCGAIPSELMESELFGHKKGSFTGATQDKQGLILSAHGGSLFLDE
IAELPLNMQVKLLRAVQEKKIRPVGSDQEIDVDFRVISASHQDLELLVQQGRFRQDLFFRIHVMDIVLPPLRERGQDILI
LANHFIQKISQEWELPVKSLTTRAEQFLLQQYFPGNVRELRNIIERAITLSDDETIDLAHLQTAPLRSSISIPSNAYDQS
DESEITMQSASPNPSSKKLPPEGLERYLENIEKEVLLNALNLTHWNRTLAAKKLGMTFRSLRYRLKKFGLDTEDDE

Nucleotide

• Length: 1431 bp

>NTDB_id=646183 L0U97_RS01305 WP_234856764.1 276275..277705(-) (pilR) [Acinetobacter junii strain WCO-9]
ATGGCAACTAAACAACCTCTCGTCTTACTCGTAGACGATGAAGAAGACTTGTGTCTTCTTATGCAAATGACGCTCGCACG
TATGGGAATCAAAACTCATCTTGCATATCGTGTGGAGCAAGCCAAAAAATTCTTTACCGAGTTTCAGTACGATGCATGTC
TAACCGATCTTAACCTTCCAGATGGAAATGGACTTGATCTCGTTAAACATGTGACTCAAAACTATCCAAACACACCCATC
GCTGTTCTTACTGCTTACGGAAATATGGACATTGCAATTGCAGCACTGAAAGCTGGAGCGTTTGACTTTGTTAGCAAACC
AGTGAATCAGACACATCTCGATCAACTGATTCAAAAAGCATTAAACCGCCCTCAACCAGAGCAAGAGGCGGTAGAAACAG
CCTTAGAAAATAAATTGTTGATTGGTCGTTCAGCTCCTATTCAGCAATTACGCATCGCTTTAAAAAAGATTGCTCGTTCT
CAAGCACCTGTTTTTATTACAGGTGAATCAGGAACAGGAAAAGAAGTTGTTGCGAACTTAGTTCATCGTTTAAGTAATCG
CAGCGAAGGACCATTCATAGCCATCAACTGTGGAGCTATTCCATCCGAATTAATGGAAAGCGAATTGTTCGGTCATAAGA
AAGGCAGCTTTACAGGTGCAACACAAGATAAACAAGGTCTTATCTTATCAGCACACGGCGGCAGCCTTTTTTTAGATGAA
ATCGCAGAACTTCCCTTAAATATGCAAGTAAAACTTTTGCGTGCAGTACAAGAGAAAAAAATTCGTCCAGTTGGCTCAGA
TCAAGAAATTGATGTGGATTTCCGTGTGATTAGTGCCAGCCACCAAGATTTAGAACTCTTGGTTCAGCAAGGTCGCTTTA
GGCAAGATTTATTCTTCCGCATTCATGTGATGGATATCGTTTTGCCCCCACTTCGTGAGCGTGGTCAAGATATCTTAATT
CTGGCAAATCATTTTATTCAAAAGATTAGCCAAGAATGGGAGTTACCTGTTAAATCCCTCACCACACGTGCAGAGCAATT
CCTCTTGCAGCAATATTTTCCAGGTAACGTTCGCGAACTTCGAAATATTATTGAACGTGCGATCACTCTCAGTGATGATG
AAACCATTGATTTGGCTCATCTACAAACCGCACCTCTGCGTAGCTCAATCAGTATTCCTTCAAATGCTTATGATCAGTCA
GATGAAAGTGAAATAACGATGCAAAGTGCGAGTCCAAATCCAAGCTCTAAAAAATTACCGCCAGAAGGTTTGGAACGCTA
TTTAGAAAATATTGAAAAAGAGGTGTTATTGAATGCTTTAAATCTGACCCACTGGAATCGAACGCTAGCAGCAAAAAAAC
TTGGAATGACCTTCCGATCTTTACGCTATCGTTTGAAAAAGTTTGGTTTAGATACTGAGGATGATGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (428-468)

• Response regulator receiver domain (Response_reg) (8-117)

• Sigma-54 interaction domain (Sigma54_activat) (140-306)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	83.824	100	0.838
pilR	Pseudomonas aeruginosa PAK	50.216	97.479	0.49