Detailed information NTG0646057

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG734_RS32465
• Genome accession: NZ_CP107780
• Coordinates: 7445380..7446666 (+)
• Length: 428 a.a.
• NCBI ID: WP_330290989.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00576
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7440380..7451666

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG734_RS32430 (OG734_32470)	-	7440470..7440970 (+)	501	WP_330290986.1	HD domain-containing protein	-
OG734_RS32435 (OG734_32475)	-	7441167..7441361 (+)	195	WP_006383514.1	hypothetical protein	-
OG734_RS32450 (OG734_32490)	tig	7442002..7443396 (+)	1395	WP_330290987.1	trigger factor	-
OG734_RS32455 (OG734_32495)	clpP	7443830..7444447 (+)	618	WP_330293871.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG734_RS32460 (OG734_32500)	clpP	7444498..7445196 (+)	699	WP_330290988.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG734_RS32465 (OG734_32505)	clpX	7445380..7446666 (+)	1287	WP_330290989.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG734_RS32470 (OG734_32510)	-	7446740..7447723 (-)	984	WP_330290990.1	hypothetical protein	-
OG734_RS32475 (OG734_32515)	-	7447860..7450484 (+)	2625	WP_330290991.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 428 a.a.
• Molecular weight: 46824.69 Da
• Isoelectric Point: 4.8288

>NTDB_id=646057 OG734_RS32465 WP_330290989.1 7445380..7446666(+) (clpX) [Streptomyces sp. NBC_00576]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQES
AKKALSVAVYNHYKRVQAGENSAGQNREDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKLVESRAGAKGIGFGATIRSKKELAAKDRFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLQAVMYEVPSRKDVARVVIT
ADVVLSNVNPTLIPRDARGRGPGEQKTA

Nucleotide

• Length: 1287 bp

>NTDB_id=646057 OG734_RS32465 WP_330290989.1 7445380..7446666(+) (clpX) [Streptomyces sp. NBC_00576]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGTGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGCCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAAGAACTCGCGGAGACGA
GTGAGGTCAGGTGGGAGGAACTCCCCAAGCCTCGCGAGATCTACGAGTTCCTCGAGGGGTACGTAGTCGGTCAGGAGTCG
GCCAAGAAGGCCCTGTCCGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACAGTGCCGGTCAAAACCG
TGAGGACGCCATCGAGTTGGCGAAGTCGAACATCCTCCTGCTGGGCCCCACGGGCTCCGGCAAGACACTCCTCGCGCAGA
CCCTGGCGCGCATGCTGAACGTCCCGTTCGCCATCGCAGACGCGACGGCGCTCACGGAGGCGGGGTATGTCGGCGAGGAC
GTCGAGAACATCCTGTTGAAGCTGATCCAGGCGGCGGACTACGACGTCAAGAAGGCCGAAACCGGAATCATCTACATCGA
CGAGATCGACAAGGTCGCGCGGAAGAGTGAAAACCCGTCGATCACGCGCGACGTGTCCGGCGAGGGCGTCCAGCAGGCCC
TGCTGAAGATCCTCGAAGGCACGACGGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGCTCGTCGAGTCCCGCGCGGGTGC
CAAGGGCATCGGCTTCGGCGCCACGATCCGCTCCAAGAAGGAGCTCGCGGCGAAGGACCGGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCCGAGTTCATCGGCCGCCTCCCGGTCATCACGTCGGTCCACAACCTCGACCGC
GAGGCCCTGCTCCAGATCCTGGTGGAGCCGCGCAACGCCCTCGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCGATCCTGCGCCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCCAGGCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGAGTCGTCATCACG
GCGGACGTCGTCCTGTCGAACGTCAACCCGACCCTGATCCCGAGGGACGCGCGCGGGCGCGGCCCGGGCGAGCAGAAGAC
TGCGTAA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.935	93.925	0.591
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.015	96.028	0.519