Detailed information NTG0645975

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OG852_RS32245
• Genome accession: NZ_CP107772
• Coordinates: 7114718..7116007 (+)
• Length: 429 a.a.
• NCBI ID: WP_133911624.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00582
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 7109718..7121007

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OG852_RS32215 (OG852_32225)	-	7109995..7110189 (+)	195	WP_030779494.1	hypothetical protein	-
OG852_RS32230 (OG852_32240)	tig	7110802..7112214 (+)	1413	WP_330349802.1	trigger factor	-
OG852_RS32235 (OG852_32245)	-	7112497..7113105 (+)	609	WP_030967072.1	ATP-dependent Clp protease proteolytic subunit	-
OG852_RS32240 (OG852_32250)	clpP	7113857..7114537 (+)	681	WP_133911623.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OG852_RS32245 (OG852_32255)	clpX	7114718..7116007 (+)	1290	WP_133911624.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OG852_RS32250 (OG852_32260)	-	7116134..7117081 (-)	948	WP_330349803.1	hypothetical protein	-
OG852_RS32255 (OG852_32265)	-	7117217..7119841 (+)	2625	WP_330349804.1	valine--tRNA ligase	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46950.78 Da
• Isoelectric Point: 4.7838

>NTDB_id=645975 OG852_RS32245 WP_133911624.1 7114718..7116007(+) (clpX) [Streptomyces sp. NBC_00582]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEA
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPREQRGGRGPGEQKTA

Nucleotide

• Length: 1290 bp

>NTDB_id=645975 OG852_RS32245 WP_133911624.1 7114718..7116007(+) (clpX) [Streptomyces sp. NBC_00582]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAACTCGCCGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCCAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGGTACGTCGTCGGCCAGGAGGCC
GCGAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGGGTCCAGGCCGGTGAGAACGGCGGAGCCCAGGGCCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTCGGCCCCACGGGCTCGGGCAAGACCCTTCTCGCACAGA
CCCTCGCCCGCATGCTGAACGTCCCGTTCGCCATCGCGGACGCCACGGCGCTGACGGAGGCGGGCTATGTCGGCGAGGAC
GTCGAGAACATCCTCCTCAAGCTCATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
TGAGATCGACAAGGTCGCCCGGAAGAGCGAGAACCCCTCCATCACGCGCGACGTGAGCGGCGAGGGTGTGCAGCAGGCGC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGACGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTCCTGTTCATCGTGGGCGGCGCCTTCGCGGGCCTGGAGAAGATCATCGAGTCCCGGGCCGGCGC
CAAGGGCATCGGCTTCGGCGCGACGATCCGCTCCAAGCGGGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTGAAGTTCGGCATGATCCCGGAGTTCATCGGCCGTCTCCCGGTCATCACCTCGGTCCACAACCTGGACCGC
GAGGCCCTGCTCCAGATCCTGGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTGTTCGAACTCGACGGCGT
GGAACTCGACTTCGAGCGTGAGGCGCTGGAGGCCATCGCCGACCAGGCCATCCTCCGCCAGACCGGCGCCCGTGGTCTGC
GCGCCATCATGGAGGAGGTCCTGATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTGGTCATCACG
GCCGACGTCGTCCACTCCAACGTCAACCCGACCCTGATCCCGCGTGAGCAGCGCGGCGGCCGGGGTCCGGGCGAGCAGAA
GACGGCGTGA

Domains

Predicted by InterProScan.

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.706	0.587
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.612	96.037	0.524