Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   L1A17_RS02805 Genome accession   NZ_CP090886
Coordinates   556396..557154 (-) Length   252 a.a.
NCBI ID   WP_000410383.1    Uniprot ID   -
Organism   Streptococcus pneumoniae strain NP7513     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 551396..562154
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1A17_RS02780 (L1A17_02780) pth 551429..551998 (-) 570 WP_000163932.1 aminoacyl-tRNA hydrolase -
  L1A17_RS02785 (L1A17_02785) ychF 552069..553184 (-) 1116 WP_001218707.1 redox-regulated ATPase YchF -
  L1A17_RS02790 (L1A17_02790) - 553268..553462 (-) 195 WP_000285194.1 DUF951 family protein -
  L1A17_RS02795 (L1A17_02795) dnaN 553527..554663 (-) 1137 WP_000581155.1 DNA polymerase III subunit beta -
  L1A17_RS02800 (L1A17_02800) dnaA 554822..556183 (-) 1362 WP_000660615.1 chromosomal replication initiator protein DnaA -
  L1A17_RS02805 (L1A17_02805) spo0J 556396..557154 (-) 759 WP_000410383.1 ParB/RepB/Spo0J family partition protein Regulator
  L1A17_RS02810 (L1A17_02810) htrA 557212..558393 (-) 1182 WP_000681597.1 trypsin-like peptidase domain-containing protein Regulator
  L1A17_RS02815 (L1A17_02815) rlmH 558576..559055 (+) 480 WP_000695929.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  L1A17_RS02825 (L1A17_02825) comC/comC1 559338..559463 (+) 126 WP_000799689.1 competence-stimulating peptide ComC Regulator
  L1A17_RS02830 (L1A17_02830) comD/comD1 559484..560809 (+) 1326 WP_015511364.1 competence system sensor histidine kinase ComD Regulator
  L1A17_RS02835 (L1A17_02835) comE 560806..561558 (+) 753 WP_000866065.1 competence system response regulator transcription factor ComE Regulator

Sequence

Protein


Download         Length: 252 a.a.        Molecular weight: 29183.53 Da        Isoelectric Point: 9.0667

>NTDB_id=645892 L1A17_RS02805 WP_000410383.1 556396..557154(-) (spo0J) [Streptococcus pneumoniae strain NP7513]
MEKFEMISITDIQKNPYQPRKEFDREKLDELAQSIKENGVIQPIIVRQSPVIGYEILAGERRYRASLLAGLRSIPAVVKQ
ISDQEMMVQSIIENLQRENLNPIEEARAYESLVEKGFTHAEIADKMGKSRPYISNSIRLLSLPEQILSEVENGKLSQAHA
RSLVGLNKEQQDYFFQRIIEEDISVRKLETLLTEKKQKKQQKTNHFIQNEEKQLRKLLGLDVEIKLSKKDSGKIIISFSN
QEEYSRIINSLK

Nucleotide


Download         Length: 759 bp        

>NTDB_id=645892 L1A17_RS02805 WP_000410383.1 556396..557154(-) (spo0J) [Streptococcus pneumoniae strain NP7513]
ATGGAAAAATTTGAAATGATTTCTATCACAGATATACAAAAAAATCCCTATCAACCCCGAAAAGAATTTGATAGAGAAAA
GCTAGATGAACTAGCACAGTCTATCAAAGAAAATGGGGTCATTCAACCGATTATTGTTCGTCAATCTCCTGTTATTGGTT
ATGAAATCCTTGCAGGAGAGAGACGCTATCGGGCTTCACTTTTAGCTGGTCTACGGTCTATCCCAGCTGTTGTTAAACAG
ATTTCAGACCAAGAGATGATGGTCCAGTCCATTATTGAAAATTTACAGAGAGAAAATTTAAACCCAATAGAAGAAGCACG
CGCCTATGAATCTCTCGTAGAGAAAGGATTCACCCATGCTGAAATTGCAGATAAGATGGGCAAGTCTCGTCCATATATCA
GCAACTCCATTCGTTTACTTTCCTTGCCAGAACAGATTCTCTCAGAAGTAGAAAATGGCAAACTATCACAAGCCCATGCG
CGTTCCCTAGTTGGGTTAAATAAGGAACAACAAGACTATTTCTTTCAACGGATTATAGAAGAAGATATTTCTGTAAGGAA
GTTAGAAACTCTTCTGACAGAGAAAAAACAAAAGAAACAGCAAAAAACTAATCATTTCATACAAAATGAAGAAAAACAGT
TAAGAAAACTACTCGGATTAGATGTAGAAATTAAACTATCTAAAAAAGACAGTGGAAAAATCATTATTTCTTTTTCAAAT
CAAGAAGAATATAGTAGAATTATCAACAGCCTGAAATAA

Domains

Predicted by InterproScan.

HTH domain found in ParB protein (HTH_ParB)

(144-192)

ParB/Sulfiredoxin domain (ParB_N)

(6-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

50.198

100

0.504