Detailed information NTG0645118

Bioinformatically predicted

Overview

• Name: clpX
• Type: Regulator
• Locus tag: OHB00_RS17985
• Genome accession: NZ_CP107734
• Coordinates: 3937834..3939123 (-)
• Length: 429 a.a.
• NCBI ID: WP_360238737.1
• Uniprot ID: -
• Organism: Streptomyces sp. NBC_00631
• Function: require for competence development (predicted from homology) Competence regulation

Genomic Context

Location: 3932834..3944123

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
OHB00_RS17975 (OHB00_17920)	-	3933992..3936622 (-)	2631	WP_406435914.1	valine--tRNA ligase	-
OHB00_RS17980 (OHB00_17925)	-	3936760..3937740 (+)	981	WP_406435915.1	hypothetical protein	-
OHB00_RS17985 (OHB00_17930)	clpX	3937834..3939123 (-)	1290	WP_360238737.1	ATP-dependent Clp protease ATP-binding subunit ClpX	Regulator
OHB00_RS17990 (OHB00_17935)	clpP	3939326..3939991 (-)	666	WP_406435916.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB00_RS17995 (OHB00_17940)	clpP	3940067..3940672 (-)	606	WP_406445831.1	ATP-dependent Clp protease proteolytic subunit	Regulator
OHB00_RS18000 (OHB00_17945)	tig	3940985..3942373 (-)	1389	WP_406435917.1	trigger factor	-
OHB00_RS18015 (OHB00_17960)	-	3942954..3943148 (-)	195	WP_093503029.1	hypothetical protein	-

Sequence

Protein

• Length: 429 a.a.
• Molecular weight: 46948.76 Da
• Isoelectric Point: 4.7809

>NTDB_id=645118 OHB00_RS17985 WP_360238737.1 3937834..3939123(-) (clpX) [Streptomyces sp. NBC_00631]
MARIGDGGDLLKCSFCGKSQKQVKKLIAGPGVYICDECIDLCNEIIEEELAETSEVRWEELPKPREIYEFLEGYVVGQEP
AKKALSVAVYNHYKRVQAGENGGAQGRDDAIELAKSNILLLGPTGSGKTLLAQTLARMLNVPFAIADATALTEAGYVGED
VENILLKLIQAADYDVKKAETGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTTASVPPQGGRKHPHQEFIQ
IDTTNVLFIVGGAFAGLEKIIESRAGAKGIGFGATIRSKRELEAKDQFEDVMPEDLVKFGMIPEFIGRLPVITSVHNLDR
EALLQILVEPRNALVKQYQRLFELDGVELDFEREALEAIADQAILRQTGARGLRAIMEEVLMSVMYEVPSRKDVARVVIT
ADVVHSNVNPTLIPRDARNGRGPGEQKSA

Nucleotide

• Length: 1290 bp

>NTDB_id=645118 OHB00_RS17985 WP_360238737.1 3937834..3939123(-) (clpX) [Streptomyces sp. NBC_00631]
GTGGCACGCATCGGTGACGGCGGCGATCTGCTCAAGTGCTCGTTCTGCGGCAAGAGCCAGAAGCAGGTCAAGAAGCTCAT
CGCAGGGCCCGGTGTGTACATCTGCGACGAGTGCATCGATCTCTGCAACGAGATCATCGAGGAGGAGCTCGCCGAGACGA
GCGAGGTGCGCTGGGAGGAACTCCCGAAGCCCCGCGAGATCTACGAGTTCCTGGAGGGCTACGTGGTGGGCCAGGAGCCC
GCCAAGAAGGCCCTCTCGGTCGCGGTGTACAACCACTACAAGCGCGTCCAGGCAGGGGAGAACGGCGGCGCCCAAGGCCG
CGACGACGCCATCGAGTTGGCGAAGTCCAACATCCTCCTGCTGGGCCCCACCGGCTCCGGCAAGACGCTCCTGGCGCAGA
CCCTGGCCCGCATGCTGAACGTCCCGTTCGCGATCGCCGACGCCACCGCGCTGACGGAGGCCGGCTACGTGGGCGAGGAC
GTGGAGAACATCCTCCTCAAGCTGATCCAGGCCGCCGACTACGACGTCAAGAAGGCCGAGACCGGGATCATCTACATCGA
CGAGATCGACAAGGTCGCCCGTAAGAGCGAAAATCCTTCGATCACGCGAGACGTCTCCGGCGAGGGCGTGCAGCAGGCCC
TGCTGAAGATCCTGGAGGGCACCACGGCCTCCGTCCCGCCGCAGGGCGGCCGCAAGCACCCGCACCAGGAGTTCATCCAG
ATCGACACGACGAACGTGCTGTTCATCGTGGGCGGTGCCTTCGCCGGCCTGGAGAAGATCATCGAGTCCCGGGCGGGTGC
CAAGGGCATCGGCTTCGGCGCCACCATCCGCTCCAAGCGCGAGCTGGAGGCCAAGGACCAGTTCGAGGACGTCATGCCCG
AGGACCTGGTCAAGTTCGGCATGATCCCGGAGTTCATCGGCCGCCTTCCGGTCATCACGAGCGTCCACAACCTCGACCGG
GAAGCCCTCCTGCAGATCCTCGTCGAGCCGCGCAACGCGCTGGTCAAGCAGTACCAGCGCCTCTTCGAACTCGACGGCGT
GGAGCTGGACTTCGAGCGCGAGGCCCTGGAGGCCATCGCCGACCAGGCCATCCTCAGGCAGACCGGCGCCCGCGGCCTGC
GCGCCATCATGGAGGAAGTCCTCATGTCGGTGATGTACGAGGTCCCGTCCCGCAAGGACGTGGCCCGCGTCGTCATCACG
GCCGACGTCGTCCACTCCAACGTCAACCCGACCCTGATCCCGCGCGACGCGCGCAACGGCCGCGGCCCGGGCGAGCAGAA
GTCGGCGTAA

Domains

Predicted by InterProScan.

• C-terminal, D2-small domain, of ClpB protein (ClpB_D2-small) (318-395)

• ClpX C4-type zinc finger (zf-C4_ClpX) (11-48)

• AAA domain (Cdc48 subfamily) (AAA_2) (115-312)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
clpX	Streptococcus mutans UA159	62.687	93.706	0.587
clpX	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	54.745	95.804	0.524