Detailed information NTG0642918

Bioinformatically predicted

Overview

• Name: chiS
• Type: Regulator
• Locus tag: IHC89_RS12435
• Genome accession: NZ_CP090495
• Coordinates: 2677215..2680607 (+)
• Length: 1130 a.a.
• NCBI ID: WP_068946920.1
• Uniprot ID: -
• Organism: Photobacterium damselae subsp. damselae strain AS-15-0759-2
• Function: chitin sensor (predicted from homology) Competence regulation

Genomic Context

Location: 2672215..2685607

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
IHC89_RS12420 (IHC89_12420)	hemL	2672926..2674218 (+)	1293	WP_005301305.1	glutamate-1-semialdehyde 2,1-aminomutase	-
IHC89_RS12425 (IHC89_12425)	-	2674594..2675682 (+)	1089	WP_005301309.1	AI-2E family transporter	-
IHC89_RS12430 (IHC89_12430)	rsmC	2675882..2676901 (+)	1020	WP_176284957.1	16S rRNA (guanine(1207)-N(2))-methyltransferase RsmC	-
IHC89_RS12435 (IHC89_12435)	chiS	2677215..2680607 (+)	3393	WP_068946920.1	response regulator	Regulator
IHC89_RS12440 (IHC89_12440)	-	2681308..2682984 (+)	1677	WP_068946919.1	ABC transporter substrate-binding protein	-
IHC89_RS12445 (IHC89_12445)	-	2683131..2684117 (+)	987	WP_065172285.1	ABC transporter permease	-
IHC89_RS12450 (IHC89_12450)	-	2684120..2685145 (+)	1026	WP_106142406.1	ABC transporter permease	-

Sequence

Protein

• Length: 1130 a.a.
• Molecular weight: 127168.28 Da
• Isoelectric Point: 6.6791

>NTDB_id=642918 IHC89_RS12435 WP_068946920.1 2677215..2680607(+) (chiS) [Photobacterium damselae subsp. damselae strain AS-15-0759-2]
MQTKQRFKRLQHTLMLAFLVLSITPLTLSALYFLNSHSKDLAEQSTSHLASLLENKKKQLSQFFAAKESEVQSFARSELA
NASGGRFYGLVGAYHQLGNINNLLNGLTREQYFKEILTAKGQKSTTNSASYVGHERYRLMYKRYNWAFDEYLKRSDFSDI
LLVDLKGNVVYSAKKPQYFALNLASGKGALKGLQPTFQAISTQAQQLKQDQEVVPVAFADFNLGGNNQSEQAWFAAPIIQ
QGYLHSYVFFQLDINKIATLLADKPQNGQTVQTLLVGQDHHMRLPNSGDLPQQLISPAINQALAGKTGVGSLLNYNNIAV
LSAFTPIKIFNHTWALVVELPEKEAFARIHQLEKIFFAAMLTAIVLVILAALWLSNSITAPLLRLTWASERVSAGDLEQK
IEGTERKDEIGRLATSFARMQCSIREKMSLISKQNQELEKNIHVIKQQNDDLQTADKLKDEFLATTSHELRTPLHGMIGI
AESLLAGANGPMQGAQRRQLEMLINSGQRLTNLVDDLLDYHKMRYGDLDIDKHAVDLASAVRLVLELSGHLLGTKPVRII
NQIPADLPLVQADEQRLEQVLYNLVGNAIKYTSEGKIVLSATVLENQVRIQVVDTGQGIPAEQLEHIFEPLVQANTNHAN
YRQGAGLGLTISRQLLELMGGRLYVSSQPMVGTTFSFTLNIASDEQIRQSHDHGKIHHFQAPLCDATPIEMANLPENLNG
ELLLVVDDEPVNLQILNNFLRLEGYRVLTAESGKQALELVQSHKPALILLDIMMPEMSGYEVCSQLRQQYTPLELPIMML
SALGQVKDRVKGFECGANDYLTKPFNKEELTARIKAHLQAGKTEFEREKNRQLAQEIQQRKQVELSLLETQTRLLGLLES
TTEAILCIQNSGRIRYANDAAAKLFKRTPEQLERHSIDELLLTHLPDELQNNHHYSGSLCFKIGEQQQNLATDILNLPEE
SGLKQMFIFGNSGPSPQQRVQMLEEAIDVLSSYAFDGDKDNLQQLRELGGEFTRLADKLGNDAPNKQDILRELLVDAMRT
TLEVWEQDTKKTKFDLAEESGLWRVYLDRSTLQTRTLDKYLHVETLPKTPRWRTVISTIDYVLDKGSAQNIQHQQLSQMR
DKLQNLLRAS

Nucleotide

• Length: 3393 bp

>NTDB_id=642918 IHC89_RS12435 WP_068946920.1 2677215..2680607(+) (chiS) [Photobacterium damselae subsp. damselae strain AS-15-0759-2]
ATGCAAACAAAACAACGATTTAAACGTCTTCAGCATACATTAATGCTGGCTTTTCTTGTTCTTAGTATTACGCCATTAAC
TCTCTCCGCACTGTATTTCCTCAACTCACACTCCAAGGATTTGGCAGAGCAAAGTACATCGCATTTGGCGTCTCTTCTTG
AGAATAAGAAAAAACAACTAAGCCAATTTTTTGCGGCTAAAGAGTCTGAGGTGCAAAGTTTTGCTCGATCAGAGCTTGCT
AATGCCAGTGGTGGCCGCTTCTATGGGTTAGTAGGGGCTTACCATCAATTAGGTAATATCAATAACCTGTTAAATGGCCT
GACGCGAGAGCAGTATTTTAAAGAGATTCTTACGGCAAAAGGGCAAAAAAGTACCACCAACAGTGCCAGTTATGTCGGCC
ATGAGCGCTATCGTTTAATGTATAAGCGTTATAACTGGGCATTTGATGAATATCTTAAGCGCTCAGATTTTAGTGATATC
TTATTGGTTGATTTAAAAGGTAATGTGGTCTACTCCGCGAAAAAACCACAGTACTTTGCTTTAAATCTTGCTTCAGGCAA
GGGGGCCTTAAAAGGGTTACAACCAACTTTCCAAGCCATTAGCACTCAAGCGCAACAGCTAAAACAAGACCAAGAAGTAG
TCCCCGTTGCTTTTGCCGATTTTAACCTAGGAGGCAATAATCAGTCAGAACAAGCCTGGTTTGCCGCCCCAATCATTCAG
CAAGGGTATTTACACAGCTACGTATTTTTCCAGCTCGATATCAATAAAATCGCAACCTTACTGGCCGATAAACCGCAAAA
TGGGCAAACGGTGCAAACTCTATTAGTAGGCCAAGATCATCACATGCGCTTACCCAATAGTGGAGATTTGCCACAACAAT
TGATCAGCCCAGCCATCAACCAAGCACTTGCTGGTAAAACTGGGGTAGGCAGTTTGCTTAACTACAATAATATTGCCGTA
CTCAGTGCCTTTACTCCGATTAAAATCTTTAACCACACCTGGGCATTGGTAGTTGAATTACCCGAAAAAGAAGCATTTGC
TCGTATTCACCAACTCGAAAAAATCTTTTTTGCAGCCATGCTTACTGCCATCGTATTAGTGATTTTAGCCGCTCTTTGGT
TATCAAACTCAATAACGGCTCCCCTATTACGTTTAACTTGGGCATCGGAGCGAGTCTCTGCAGGCGATCTAGAACAAAAA
ATCGAAGGAACAGAACGTAAAGATGAAATTGGTCGTCTTGCCACTAGCTTTGCTCGAATGCAATGTTCTATTCGGGAAAA
GATGAGTTTGATTAGCAAGCAAAATCAAGAGCTTGAAAAAAATATTCACGTAATCAAACAACAAAATGATGATCTACAAA
CCGCCGATAAACTAAAAGATGAGTTCTTAGCGACAACCTCACATGAGTTGCGCACCCCTCTTCACGGTATGATTGGGATA
GCCGAATCCTTACTTGCTGGAGCAAATGGGCCAATGCAAGGAGCCCAACGCCGTCAATTGGAAATGTTGATCAACAGTGG
GCAGCGCCTAACGAACTTAGTTGATGATTTACTTGATTATCACAAAATGCGTTATGGCGATCTCGATATTGATAAACATG
CAGTCGATCTTGCCAGCGCTGTTCGGTTAGTCCTTGAATTATCAGGCCATTTATTGGGAACCAAACCGGTTCGAATCATT
AACCAAATACCCGCTGATTTACCTTTAGTTCAAGCCGATGAACAACGCCTAGAGCAAGTGCTGTATAACTTGGTTGGTAA
TGCAATCAAATATACCTCTGAAGGTAAGATTGTGCTTTCTGCAACAGTATTGGAAAACCAAGTTCGCATTCAAGTGGTTG
ATACAGGACAAGGAATTCCGGCAGAACAACTTGAACACATCTTTGAACCACTGGTACAAGCCAACACCAATCATGCTAAC
TATCGTCAAGGAGCAGGCCTTGGTTTAACCATTAGCCGTCAATTACTGGAGTTAATGGGTGGTCGCCTGTACGTCAGCAG
TCAGCCAATGGTGGGAACCACTTTTAGTTTCACCCTAAACATCGCCTCCGACGAACAAATTCGCCAAAGCCATGATCACG
GTAAAATTCATCACTTTCAAGCTCCATTGTGTGATGCCACTCCGATTGAAATGGCAAATTTACCTGAAAACTTAAATGGT
GAACTACTACTCGTGGTTGATGATGAACCCGTTAATCTTCAGATACTCAATAACTTCCTAAGACTTGAAGGGTATCGAGT
TCTCACTGCAGAAAGCGGAAAACAGGCCCTTGAGTTAGTACAAAGCCACAAACCCGCACTGATTTTGCTCGATATTATGA
TGCCAGAAATGAGTGGTTATGAGGTTTGTAGCCAATTGCGCCAACAATATACCCCATTAGAACTACCGATCATGATGCTA
TCTGCATTGGGGCAAGTTAAAGATCGCGTTAAAGGTTTTGAATGCGGCGCCAATGATTACCTAACAAAACCTTTTAATAA
AGAAGAGCTTACTGCACGTATAAAAGCCCATCTTCAAGCGGGAAAAACTGAATTTGAGCGAGAAAAAAATCGTCAATTAG
CTCAAGAAATTCAACAACGTAAGCAAGTTGAGTTAAGTTTACTTGAGACCCAAACTCGATTACTTGGCCTATTAGAATCC
ACCACCGAAGCCATTTTATGTATTCAAAATAGTGGGCGAATTCGTTATGCCAATGACGCTGCGGCTAAATTATTTAAACG
CACCCCAGAGCAATTGGAGCGCCACTCTATCGATGAACTACTGCTAACCCACCTACCTGATGAGTTACAAAATAATCATC
ATTACAGTGGTTCACTGTGTTTCAAAATTGGCGAACAACAACAAAACCTTGCTACCGATATCCTCAATTTGCCAGAAGAG
TCTGGACTTAAGCAGATGTTTATCTTCGGCAATAGCGGGCCATCGCCACAGCAACGAGTACAAATGCTTGAAGAAGCTAT
TGATGTTTTATCGAGCTATGCTTTTGATGGTGACAAAGACAACTTACAACAATTGCGTGAGCTAGGTGGAGAATTCACCA
GACTGGCAGACAAATTGGGTAATGATGCCCCTAATAAACAAGATATTTTGCGCGAATTGCTGGTTGATGCCATGCGTACA
ACACTTGAGGTTTGGGAGCAAGATACGAAAAAAACCAAGTTTGATTTAGCCGAAGAGAGTGGATTATGGCGTGTTTATCT
CGATCGTAGTACGCTACAAACTCGCACCTTAGATAAATATCTCCATGTTGAGACTCTTCCTAAAACGCCGCGTTGGCGCA
CGGTTATTAGCACCATAGACTATGTTCTTGATAAAGGCAGTGCTCAAAATATCCAACATCAACAGCTGAGCCAGATGCGA
GATAAATTGCAGAACTTATTACGAGCAAGTTAA

Domains

Predicted by InterproScan.

• His Kinase A (phospho-acceptor) domain (HisKA) (459-524)

• Response regulator receiver domain (Response_reg) (724-835)

• HAMP domain (HAMP) (373-421)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (573-680)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
chiS	Vibrio cholerae strain A1552	58.938	100	0.589