Detailed information NTG0641756

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: LY257_RS05820
• Genome accession: NZ_CP090367
• Coordinates: 1194230..1195030 (-)
• Length: 266 a.a.
• NCBI ID: WP_000841136.1
• Uniprot ID: -
• Organism: Helicobacter pylori strain CCUG 17875
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1189230..1200030

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LY257_RS05775 (LY257_05725)	-	1189565..1189789 (-)	225	WP_000426626.1	hypothetical protein	-
LY257_RS05780 (LY257_05730)	-	1189779..1190564 (-)	786	WP_000119822.1	hypothetical protein	-
LY257_RS05785 (LY257_05735)	-	1190564..1190945 (-)	382	Protein_1122	DUF1294 domain-containing protein	-
LY257_RS05790 (LY257_05740)	-	1191248..1191514 (-)	267	WP_025444753.1	hypothetical protein	-
LY257_RS05795 (LY257_05745)	-	1191502..1191904 (-)	403	Protein_1124	glycoside hydrolase family protein	-
LY257_RS05800 (LY257_05750)	-	1191934..1192494 (-)	561	WP_000038906.1	hypothetical protein	-
LY257_RS05805 (LY257_05755)	-	1192478..1192816 (-)	339	WP_000699883.1	hypothetical protein	-
LY257_RS05810 (LY257_05760)	-	1192931..1193602 (-)	672	WP_189394268.1	tetratricopeptide repeat protein	-
LY257_RS05815 (LY257_05765)	dprB	1193829..1194233 (-)	405	WP_000599144.1	Holliday junction resolvase RuvX	Machinery gene
LY257_RS05820 (LY257_05770)	dprA	1194230..1195030 (-)	801	WP_000841136.1	DNA-processing protein DprA	Machinery gene
LY257_RS05825 (LY257_05775)	minE	1195042..1195275 (-)	234	WP_000051414.1	cell division topological specificity factor MinE	-
LY257_RS05830 (LY257_05780)	minD	1195272..1196078 (-)	807	WP_054833651.1	septum site-determining protein MinD	-
LY257_RS05835 (LY257_05785)	ilvC	1196102..1197094 (-)	993	WP_001207770.1	ketol-acid reductoisomerase	-
LY257_RS05845 (LY257_05795)	-	1197343..1198125 (+)	783	WP_001168280.1	NAD+ synthase	-
LY257_RS05850 (LY257_05800)	-	1198122..1199060 (+)	939	WP_000833915.1	tetraacyldisaccharide 4'-kinase	-
LY257_RS05855 (LY257_05805)	pseH	1198993..1199535 (-)	543	WP_000742657.1	UDP-4-amino-4, 6-dideoxy-N-acetyl-beta-L-altrosamine N-acetyltransferase	-

Sequence

Protein

• Length: 266 a.a.
• Molecular weight: 29901.83 Da
• Isoelectric Point: 7.7746

>NTDB_id=641756 LY257_RS05820 WP_000841136.1 1194230..1195030(-) (dprA) [Helicobacter pylori strain CCUG 17875]
MKSNFQYSVLENIHKAFDVLKDPPKKLYCVGDIKLLEAPLKVAIIGTRRPTPYSKQHTITLARELAKNGAVIVSGGALGV
DIIAQENALPKTIMLSPCSLDLIYPTNNYKVIQEIAQNGLILSEYEKDFMPIKGSFLARNRLVIALSDAVIIPQADLKSG
SMSSARLAQKYQKPLFVLPQRLNESDGTNELLEKGQAQGIFNIQNFINTLLKDYHLKEMPEMEDEFLEYCAKNPSYEEAY
LKFGDKLLEYELLGKIKRINHIVVLA

Nucleotide

• Length: 801 bp

>NTDB_id=641756 LY257_RS05820 WP_000841136.1 1194230..1195030(-) (dprA) [Helicobacter pylori strain CCUG 17875]
ATGAAGAGCAACTTCCAATACAGCGTGCTAGAGAATATCCATAAAGCCTTTGACGTGCTCAAAGACCCCCCTAAAAAACT
CTATTGTGTGGGCGATATAAAGCTTTTAGAAGCGCCTTTAAAAGTGGCTATCATCGGCACAAGAAGACCCACCCCTTATA
GCAAGCAACACACGATCACTCTAGCCAGAGAGCTTGCTAAAAATGGCGCGGTTATTGTGAGCGGAGGAGCGTTAGGTGTG
GATATTATCGCTCAAGAAAACGCCTTACCAAAAACCATCATGCTTTCGCCTTGCAGTTTGGATTTGATCTATCCTACGAA
CAATTATAAAGTGATCCAAGAAATCGCGCAAAACGGCTTGATTTTAAGCGAATATGAAAAGGATTTCATGCCCATTAAAG
GCTCTTTTTTAGCGAGAAACCGCCTAGTGATCGCTTTAAGCGATGCGGTGATTATCCCCCAAGCGGATTTAAAAAGCGGC
TCTATGAGCAGCGCGAGATTAGCTCAAAAATACCAAAAGCCCTTGTTTGTTTTACCCCAACGCTTGAATGAGAGCGATGG
CACTAATGAGCTTTTAGAAAAAGGGCAGGCTCAAGGGATATTTAATATTCAAAATTTTATAAACACCCTTTTAAAAGACT
ACCATTTAAAAGAAATGCCTGAAATGGAAGATGAATTTTTAGAATATTGCGCCAAAAATCCGAGCTATGAAGAAGCGTAT
CTCAAATTTGGGGATAAGCTTTTAGAATACGAGCTGTTGGGTAAGATTAAGCGCATCAATCATATCGTGGTGTTAGCGTG
A

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (20-197)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Helicobacter pylori 26695	96.241	100	0.962
dprA	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	48.673	84.962	0.414