Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   LXN49_RS14660 Genome accession   NZ_CP090354
Coordinates   2880143..2882434 (-) Length   763 a.a.
NCBI ID   WP_234107343.1    Uniprot ID   -
Organism   Bacillus safensis strain H31R-08     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 2875143..2887434
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXN49_RS14620 (LXN49_14620) - 2875534..2875965 (+) 432 WP_024423315.1 Na(+)/H(+) antiporter subunit B -
  LXN49_RS14625 (LXN49_14625) - 2875965..2876306 (+) 342 WP_048237322.1 Na(+)/H(+) antiporter subunit C -
  LXN49_RS14630 (LXN49_14630) - 2876299..2877777 (+) 1479 WP_234107342.1 Na+/H+ antiporter subunit D -
  LXN49_RS14635 (LXN49_14635) - 2877784..2878263 (+) 480 WP_024425941.1 Na+/H+ antiporter subunit E -
  LXN49_RS14640 (LXN49_14640) - 2878263..2878544 (+) 282 WP_024425942.1 Na(+)/H(+) antiporter subunit F1 -
  LXN49_RS14645 (LXN49_14645) mnhG 2878528..2878902 (+) 375 WP_144472360.1 monovalent cation/H(+) antiporter subunit G -
  LXN49_RS14650 (LXN49_14650) - 2879008..2879397 (-) 390 WP_048237324.1 hotdog fold thioesterase -
  LXN49_RS14655 (LXN49_14655) comA 2879421..2880062 (-) 642 WP_048237325.1 response regulator transcription factor Regulator
  LXN49_RS14660 (LXN49_14660) comP 2880143..2882434 (-) 2292 WP_234107343.1 ATP-binding protein Regulator
  LXN49_RS14665 (LXN49_14665) comX 2882448..2882621 (-) 174 WP_024425944.1 competence pheromone ComX -
  LXN49_RS14670 (LXN49_14670) - 2882599..2883522 (-) 924 WP_234107344.1 polyprenyl synthetase family protein -
  LXN49_RS14675 (LXN49_14675) degQ 2883674..2883814 (-) 141 WP_003213123.1 degradation enzyme regulation protein DegQ Regulator
  LXN49_RS14680 (LXN49_14680) - 2884320..2884676 (+) 357 WP_234107345.1 inner spore coat protein -
  LXN49_RS14685 (LXN49_14685) - 2884712..2885938 (-) 1227 WP_234107943.1 EAL and HDOD domain-containing protein -

Sequence


Protein


Download         Length: 763 a.a.        Molecular weight: 88037.33 Da        Isoelectric Point: 6.9282

>NTDB_id=641615 LXN49_RS14660 WP_234107343.1 2880143..2882434(-) (comP) [Bacillus safensis strain H31R-08]
MQKFYSKLTVILMILSFIYVIYISYINVFNIFVGAVVSVNSDGQLEIEDVVDFTDSYYAGVRKGDIILEVNGNKEPTEEV
RRGYLANVKSLVVDRHGDEIEIENVSLLSQENLFIYIIPIIFYSICLFCIFMILKINKSRKKESAYILALFLLAVAVAYV
SSGGSGKGEYISSFVVIFTMTSVPSLYMHFMYQYLKELGTVIISWRVLLCLYAVPFINIVLEILFKNMVLAAFNLLSFFA
LAFITIIITLRAAKKLKGTEIGNVLSAFALILISSFSPFMLFFIIPYLFHKYFISPYILASFALLIPFFLVYQFMTNKLY
NVDFFLGRIKYYSLLAITPTIVVVVIFDFIQKPSANFYTMKFTIITYILMLTVFYFKEIIDFRFRLKRFSEKHNYQDSVF
KFTQLIREASSLHQVFYHLKYTILEVLVVNKAFVLEVKADGQVEEIDESTEDSKLWKKYVDQFQELLGEVGKIIALDKGF
MMKIGERGGHSFVICCLSNLRTPKLSRDEISWLKTLAFYTSVSLENVVKIEELMEHLDDLKQREANPAWLKKIMFAMEEK
QRSDLARDLHDSVLQDLISLKRQSEMFLTNFQNNQCPTSIENSLISWNDQMSKVIQTTRETCHELRPQLLYDLGLVKAIS
KLTSQIQEEAPFHIRLNTTRFDKELDIDIDSQLNIYRIVQELLSNALKHSQATQVLVMLICIKDQVVLHYEDDGVGFDAS
HLDQHTMSMGLSGIRERVKALNGKLQIHTAPEKGLKVKIEMEL

Nucleotide


Download         Length: 2292 bp        

>NTDB_id=641615 LXN49_RS14660 WP_234107343.1 2880143..2882434(-) (comP) [Bacillus safensis strain H31R-08]
ATGCAAAAATTTTACTCGAAATTAACTGTTATATTAATGATCCTTAGCTTTATTTATGTGATTTATATTTCCTACATCAA
TGTGTTTAATATTTTTGTAGGAGCAGTCGTTTCGGTGAATAGTGACGGCCAACTTGAAATAGAGGATGTTGTTGATTTTA
CAGACAGCTATTATGCTGGTGTTAGGAAAGGCGATATCATCCTTGAAGTGAACGGTAACAAAGAACCAACCGAAGAAGTA
AGACGAGGTTATTTAGCGAATGTCAAGAGTTTAGTTGTTGATAGACATGGTGATGAAATTGAAATAGAGAATGTAAGCTT
ATTGAGTCAAGAAAATCTGTTTATTTATATAATACCTATCATTTTTTATTCGATCTGTCTATTCTGTATATTTATGATTT
TAAAAATCAATAAATCTAGGAAAAAAGAGTCTGCATATATTCTAGCTCTCTTTTTGCTAGCTGTTGCTGTAGCCTATGTA
AGCTCTGGTGGCTCTGGTAAAGGGGAATATATTAGCAGCTTTGTCGTAATTTTTACGATGACTAGTGTACCGTCGTTATA
TATGCACTTTATGTATCAATATTTAAAGGAATTAGGAACGGTAATTATTAGTTGGCGTGTACTTCTTTGTTTGTATGCCG
TCCCTTTTATAAATATTGTATTAGAAATTCTGTTTAAAAATATGGTTTTAGCTGCTTTTAACTTACTTTCATTCTTTGCA
CTTGCATTTATTACGATTATTATCACATTAAGGGCTGCTAAAAAGTTGAAAGGGACTGAAATCGGAAATGTCCTTAGTGC
CTTTGCACTTATTTTGATCTCATCATTCAGTCCATTTATGCTATTTTTTATTATTCCTTATTTATTTCATAAATATTTTA
TTTCACCTTATATCCTAGCATCGTTCGCTTTATTGATTCCGTTTTTCCTAGTCTATCAATTTATGACAAATAAATTATAT
AATGTTGATTTCTTTTTGGGGAGAATCAAATATTATAGTCTTTTAGCCATCACACCTACTATAGTGGTAGTCGTTATATT
TGATTTCATTCAGAAGCCAAGTGCTAACTTTTATACAATGAAATTTACGATTATCACGTATATTCTTATGCTCACTGTCT
TCTATTTTAAAGAAATCATCGACTTCCGTTTTCGTCTGAAGCGTTTTTCAGAGAAGCATAATTACCAAGATAGCGTGTTT
AAATTCACGCAGCTCATTCGTGAGGCGTCATCACTTCACCAAGTGTTCTATCATTTAAAATACACCATTTTAGAAGTACT
TGTTGTGAACAAAGCCTTTGTGCTTGAAGTGAAGGCAGATGGACAGGTAGAAGAGATTGATGAATCGACAGAGGACAGTA
AGCTATGGAAAAAGTATGTAGACCAATTTCAAGAATTATTAGGTGAAGTTGGAAAAATCATTGCGCTTGATAAAGGATTC
ATGATGAAAATTGGTGAGCGGGGCGGTCACTCTTTTGTGATTTGCTGTTTATCTAATTTACGGACACCAAAATTGTCTCG
TGATGAAATTTCTTGGCTGAAAACATTGGCCTTTTATACAAGTGTCAGTTTAGAAAATGTCGTCAAGATCGAAGAATTGA
TGGAGCATCTTGACGATTTGAAACAGCGCGAGGCCAATCCTGCCTGGCTGAAGAAAATCATGTTTGCGATGGAAGAAAAG
CAGCGCTCAGATTTAGCGAGGGATCTTCATGATTCCGTGCTGCAGGACTTGATATCGTTAAAAAGGCAGTCAGAGATGTT
TTTAACGAATTTCCAAAACAACCAATGCCCAACCTCCATTGAAAATTCGCTTATCTCATGGAACGATCAAATGTCTAAAG
TGATTCAGACGACGAGAGAAACGTGTCATGAGCTTCGGCCGCAGCTGCTGTATGATTTAGGTTTAGTAAAGGCGATATCG
AAGCTGACTTCTCAAATTCAAGAGGAAGCACCGTTTCATATAAGGCTGAATACGACACGCTTTGATAAAGAGCTGGACAT
TGATATTGATTCACAGCTGAATATTTACCGAATTGTTCAGGAGCTGTTATCCAATGCCCTGAAGCACTCCCAAGCCACTC
AAGTGTTAGTGATGCTGATTTGTATTAAAGATCAGGTTGTTCTTCACTATGAGGATGATGGAGTCGGTTTTGATGCAAGT
CATCTTGATCAGCACACAATGAGCATGGGGCTATCAGGAATTAGGGAACGAGTCAAAGCGTTAAATGGAAAGCTGCAAAT
TCACACAGCACCGGAAAAAGGGCTTAAGGTGAAAATTGAAATGGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

49.357

100

0.503