Detailed information
Bioinformatically predicted
Overview
| Name | pilP | Type | Machinery gene |
| Locus tag | LXM48_RS00495 | Genome accession | NZ_CP090180 |
| Coordinates | 99370..99897 (+) | Length | 175 a.a. |
| NCBI ID | WP_004691496.1 | Uniprot ID | A0A2W5RPS2 |
| Organism | Acinetobacter johnsonii strain DJ-Red | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 94370..104897
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| LXM48_RS00480 (LXM48_00480) | pilM | 96937..97995 (+) | 1059 | WP_058870420.1 | pilus assembly protein PilM | Machinery gene |
| LXM48_RS00485 (LXM48_00485) | pilN | 97995..98651 (+) | 657 | WP_004691498.1 | PilN domain-containing protein | Machinery gene |
| LXM48_RS00490 (LXM48_00490) | pilO | 98648..99370 (+) | 723 | WP_234304417.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| LXM48_RS00495 (LXM48_00495) | pilP | 99370..99897 (+) | 528 | WP_004691496.1 | pilus assembly protein PilP | Machinery gene |
| LXM48_RS00500 (LXM48_00500) | pilQ | 99917..101995 (+) | 2079 | WP_234304418.1 | type IV pilus secretin PilQ family protein | Machinery gene |
| LXM48_RS00505 (LXM48_00505) | - | 102084..102566 (+) | 483 | WP_234305130.1 | shikimate kinase | - |
| LXM48_RS00510 (LXM48_00510) | aroB | 102597..103682 (+) | 1086 | WP_125280900.1 | 3-dehydroquinate synthase | - |
| LXM48_RS00515 (LXM48_00515) | - | 103690..104529 (+) | 840 | WP_234304419.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 175 a.a. Molecular weight: 19385.59 Da Isoelectric Point: 7.1331
>NTDB_id=641003 LXM48_RS00495 WP_004691496.1 99370..99897(+) (pilP) [Acinetobacter johnsonii strain DJ-Red]
MKYQNLMLSLCVGLFLIGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMRGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVINITATQIDLIEIIPDGREG
YVERPRSLVLIGPAP
MKYQNLMLSLCVGLFLIGCDSRIDAVNMQMAEIRNQPPLPIEPAPDFPPVPTFNYAAHQLKSPFMPSSLAAELKIMAGKR
VYPNLSRQLQPLESYAIESLNMKGSMRGQNGQILALIQTPDGEIERVQRGSYLGMNHGRVINITATQIDLIEIIPDGREG
YVERPRSLVLIGPAP
Nucleotide
Download Length: 528 bp
>NTDB_id=641003 LXM48_RS00495 WP_004691496.1 99370..99897(+) (pilP) [Acinetobacter johnsonii strain DJ-Red]
ATGAAATATCAAAATCTCATGCTTAGTCTCTGCGTTGGACTATTTCTTATCGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGCAATCAGCCACCATTGCCGATTGAACCTGCGCCAGATTTCCCACCTGTACCGACTTTTA
ATTATGCCGCGCACCAATTAAAGAGCCCGTTTATGCCAAGCTCGTTAGCGGCTGAACTGAAAATTATGGCTGGAAAACGT
GTATATCCAAACCTATCTCGCCAATTACAACCCTTGGAAAGTTATGCGATTGAATCGCTGAACATGAAAGGCAGCATGCG
CGGACAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGCGTGCAGCGTGGTAGTTATTTGG
GGATGAATCATGGTCGTGTGATTAATATCACCGCCACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAGCGCCCGAGAAGCCTAGTATTAATTGGGCCGGCGCCTTAA
ATGAAATATCAAAATCTCATGCTTAGTCTCTGCGTTGGACTATTTCTTATCGGTTGTGATTCACGTATTGATGCGGTCAA
TATGCAAATGGCTGAAATTCGCAATCAGCCACCATTGCCGATTGAACCTGCGCCAGATTTCCCACCTGTACCGACTTTTA
ATTATGCCGCGCACCAATTAAAGAGCCCGTTTATGCCAAGCTCGTTAGCGGCTGAACTGAAAATTATGGCTGGAAAACGT
GTATATCCAAACCTATCTCGCCAATTACAACCCTTGGAAAGTTATGCGATTGAATCGCTGAACATGAAAGGCAGCATGCG
CGGACAAAATGGACAAATTTTGGCGTTGATTCAAACACCTGATGGTGAAATTGAACGCGTGCAGCGTGGTAGTTATTTGG
GGATGAATCATGGTCGTGTGATTAATATCACCGCCACACAAATTGATTTGATTGAAATTATTCCGGATGGGCGTGAGGGC
TATGTCGAGCGCCCGAGAAGCCTAGTATTAATTGGGCCGGCGCCTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilP | Acinetobacter baumannii D1279779 |
76.571 |
100 |
0.766 |
| comL | Acinetobacter baylyi ADP1 |
71.429 |
100 |
0.714 |