Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   LXE94_RS16510 Genome accession   NZ_CP090125
Coordinates   3069800..3072109 (-) Length   769 a.a.
NCBI ID   WP_257986178.1    Uniprot ID   -
Organism   Bacillus subtilis strain Bs96     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3064800..3077109
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  LXE94_RS16470 (LXE94_16430) mrpB 3065267..3065698 (+) 432 WP_003228819.1 Na(+)/H(+) antiporter subunit B -
  LXE94_RS16475 (LXE94_16435) mrpC 3065698..3066039 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  LXE94_RS16480 (LXE94_16440) mrpD 3066032..3067513 (+) 1482 WP_095843910.1 Na+/H+ antiporter subunit D -
  LXE94_RS16485 (LXE94_16445) mrpE 3067519..3067995 (+) 477 WP_003228815.1 Na+/H+ antiporter subunit E -
  LXE94_RS16490 (LXE94_16450) mrpF 3067995..3068279 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  LXE94_RS16495 (LXE94_16455) mnhG 3068263..3068637 (+) 375 WP_041332992.1 monovalent cation/H(+) antiporter subunit G -
  LXE94_RS16500 (LXE94_16460) yuxO 3068676..3069056 (-) 381 WP_217002947.1 hotdog fold thioesterase -
  LXE94_RS16505 (LXE94_16465) comA 3069075..3069719 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  LXE94_RS16510 (LXE94_16470) comP 3069800..3072109 (-) 2310 WP_257986178.1 two-component system sensor histidine kinase ComP Regulator
  LXE94_RS16515 (LXE94_16475) comX 3072128..3072295 (-) 168 WP_041057586.1 competence pheromone ComX Regulator
  LXE94_RS16520 (LXE94_16480) comQ 3072283..3073182 (-) 900 WP_038828674.1 class 1 isoprenoid biosynthesis enzyme Regulator
  LXE94_RS16525 (LXE94_16485) degQ 3073367..3073507 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  LXE94_RS16530 (LXE94_16490) - 3073729..3073854 (+) 126 WP_003228793.1 hypothetical protein -
  LXE94_RS16535 (LXE94_16495) - 3073968..3074342 (+) 375 WP_257986179.1 hypothetical protein -
  LXE94_RS16540 (LXE94_16500) pdeH 3074318..3075547 (-) 1230 WP_014480707.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89253.63 Da        Isoelectric Point: 7.8261

>NTDB_id=640720 LXE94_RS16510 WP_257986178.1 3069800..3072109(-) (comP) [Bacillus subtilis strain Bs96]
MKNLMKKFTIAVIVLSILYISYTTYISMNGIIIGTKVQKNDKSQFVIEEISKSSYGQFVGLRQGDIILKINEEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRSYSFFLFVLPLVFYFLSIICIFYIFKVNKKRRSFAAYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQTYLGEIGKTFLNRISFLYIIPIFNLGIEFFQDYLQVDIDFLATVN
LVSFAILTLFSFSAIYFHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFPALASASLLALIPLGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVLDIQMNPVRQTVFFFVVMFAVFYFKEVIDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDHKVIFLDKHEIEPDWHFYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDQEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=640720 LXE94_RS16510 WP_257986178.1 3069800..3072109(-) (comP) [Bacillus subtilis strain Bs96]
TTGAAGAACTTGATGAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTCTATATAAGCTATACAACTTATATTAG
TATGAATGGGATTATTATTGGGACTAAGGTTCAAAAAAATGATAAAAGTCAATTTGTAATAGAAGAAATATCAAAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGATATCATATTAAAAATCAATGAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTTTGGATATTTTAAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGATCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTACTTTTTAAGCATAATATGCATTT
TTTATATATTTAAGGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCGATA
GCATATATAAGTGCAGGTGGACCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAACATACCTTGGAGAAATAGGAAAAACTTTTTTGAATAGAATCTCCTTTCTTTATA
TCATACCAATATTTAATCTTGGAATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCGACTGTTAAC
TTGGTTTCTTTTGCAATTTTGACTCTATTTTCTTTTTCAGCGATATATTTTCATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTACTAATTTTAACAAACACTTTATCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAATAA
TATTTACAGGTAATTATATTTTCCCGGCATTAGCTTCGGCGTCATTACTAGCACTTATTCCGTTAGGGTTAGTATATCAA
TTTGTAGCCAATAAAATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTGGCCATGATACCAAC
TCTTCTAATAGTTGGTGCATTAGTTCTGTTTGATGTATTGGACATCCAGATGAACCCTGTGCGTCAAACTGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATAGATTTTAAATTTCGGTTAAAACGTTTCTCTGAAAAATTC
AACTATCAGGACAGTATCTTTAAATATACTCAGCTAATGAGGGGGGTAACTTCTCTCCAACAAGTCTTTAAAGAACTGAA
AAATACTATTTTGGATGTTTTACTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCACAAAGTGATATTTTTAG
ATAAGCATGAAATTGAACCGGACTGGCATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATCGGGAAAATTATT
GAAGTCAATCAGGGTTTTCTTATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCTCGGCTAACACGGGATGAGATATCATGGTTGAAAACACTGTCTTTCTATACAAGTGTGTCCATGGAAAATGTCA
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCCGTTCTTCAGGATTTGATTTCATTAAA
ACGCCAGTGTGAGCTGTTTCTGGGTGATTTCAAGAAGGATGATAATCCGTGCCGTGAAGAGGTGCAGGACAAGCTTGTGC
AGATGAATGAGCAGATGTCTGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGCGGCCGCAGCTTCTGTATGAT
CTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCGTTTCATATCCGTTTAAATACCGG
GAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTGTACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATTCAAAACAAAATCGTTCTTCATTATGAGGATGATGGC
GTAGGGTTTGATCAGGAAAAGAATACTGAGCATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACAAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

97.269

100

0.973