Detailed information NTG0640542

Bioinformatically predicted

Overview

• Name: crp
• Type: Regulator
• Locus tag: LXF01_RS06175
• Genome accession: NZ_CP090067
• Coordinates: 1260247..1260957 (+)
• Length: 236 a.a.
• NCBI ID: WP_180004890.1
• Uniprot ID: -
• Organism: Acinetobacter sp. SH20PTE14
• Function: regulate competence development (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	1258790..1259266	1260247..1260957	flank	981

Gene organization within MGE regions

Location: 1258790..1260957

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXF01_RS06170 (LXF01_06170)	-	1259670..1260098 (-)	429	WP_180116761.1	OsmC family protein	-
LXF01_RS06175 (LXF01_06175)	crp	1260247..1260957 (+)	711	WP_180004890.1	cAMP-activated global transcriptional regulator CRP	Regulator

Sequence

Protein

• Length: 236 a.a.
• Molecular weight: 26567.21 Da
• Isoelectric Point: 4.6738

>NTDB_id=640542 LXF01_RS06175 WP_180004890.1 1260247..1260957(+) (crp) [Acinetobacter sp. SH20PTE14]
MTSNFSQLSTDALSPGQLPESVKALLKRAYINRYPKRTTIIDAGSESKSLYLILKGSVSIILREDDEREIVVAYLNAGDF
FGEMGLFEANAQRTAEVRTRDVCEIAEITYENFHELSKQYPDLSYAVFAQLVRRLKNTTRKVTDLAFIDVSGRIARCLID
LSSQPEAMILPNGRQIRITRQEIGRIVGCSREMVGRVLKTLEEQGMIETDGKAILIFDASLEDKSQLASDEFDDEE

Nucleotide

• Length: 711 bp

>NTDB_id=640542 LXF01_RS06175 WP_180004890.1 1260247..1260957(+) (crp) [Acinetobacter sp. SH20PTE14]
ATGACTTCAAACTTTTCACAACTTAGCACAGATGCGCTATCTCCGGGGCAGTTACCTGAGTCGGTGAAGGCATTATTAAA
ACGTGCATATATCAATCGTTACCCAAAACGTACAACAATCATTGATGCGGGCTCAGAATCTAAATCTTTGTATTTAATTC
TTAAGGGTTCAGTATCTATCATTTTACGCGAAGATGATGAGCGTGAAATTGTGGTTGCGTACTTAAATGCGGGTGACTTT
TTTGGGGAAATGGGTCTATTCGAAGCAAATGCACAGCGTACTGCAGAAGTGCGTACGCGAGATGTATGTGAAATTGCTGA
GATTACCTATGAAAACTTTCATGAATTAAGTAAACAATACCCAGACTTAAGTTATGCGGTATTTGCACAGCTTGTACGCC
GTCTTAAAAATACGACGCGTAAAGTAACTGACCTTGCGTTTATTGACGTGTCAGGTCGAATTGCACGTTGCTTAATTGAT
TTATCTTCACAACCTGAAGCAATGATTTTGCCGAATGGTCGCCAGATTCGTATTACTCGTCAAGAGATTGGTCGTATCGT
GGGTTGTTCCCGTGAAATGGTTGGTCGTGTTCTAAAAACACTTGAAGAGCAAGGCATGATTGAAACTGATGGTAAAGCGA
TTCTAATTTTTGATGCATCGCTTGAAGATAAAAGTCAATTGGCTTCTGACGAATTTGACGACGAAGAATAA

Domains

Predicted by InterproScan.

• Cyclic nucleotide-binding domain (cNMP_binding) (33-120)

• Bacterial regulatory proteins, crp family (Crp) (176-207)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
crp	Acinetobacter baumannii D1279779	90.254	100	0.903
crp	Vibrio cholerae strain A1552	47.573	87.288	0.415
crp	Haemophilus influenzae Rd KW20	48.718	82.627	0.403