Detailed information NTG0640524

Bioinformatically predicted

Overview

• Name: pilR
• Type: Regulator
• Locus tag: LXF01_RS01095
• Genome accession: NZ_CP090067
• Coordinates: 234153..235580 (-)
• Length: 475 a.a.
• NCBI ID: WP_267967499.1
• Uniprot ID: -
• Organism: Acinetobacter sp. SH20PTE14
• Function: regulation of type IV pilus assembly (predicted from homology) Competence regulation

Genomic Context

Location: 229153..240580

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LXF01_RS01080 (LXF01_01080)	lptG	230197..231267 (+)	1071	WP_180129621.1	LPS export ABC transporter permease LptG	-
LXF01_RS01085 (LXF01_01085)	gpmI	231390..232937 (+)	1548	WP_180077179.1	2,3-bisphosphoglycerate-independent phosphoglycerate mutase	-
LXF01_RS01090 (LXF01_01090)	-	232955..234130 (+)	1176	WP_233944918.1	S41 family peptidase	-
LXF01_RS01095 (LXF01_01095)	pilR	234153..235580 (-)	1428	WP_267967499.1	sigma-54 dependent transcriptional regulator	Regulator
LXF01_RS01100 (LXF01_01100)	pilS	235600..237165 (-)	1566	WP_111884855.1	ATP-binding protein	Regulator
LXF01_RS01105 (LXF01_01105)	-	237188..237823 (-)	636	WP_078189449.1	response regulator	-
LXF01_RS01110 (LXF01_01110)	-	238036..239085 (+)	1050	WP_233945407.1	serine hydrolase	-
LXF01_RS01115 (LXF01_01115)	thrC	239208..240347 (-)	1140	WP_233944920.1	threonine synthase	-

Sequence

Protein

• Length: 475 a.a.
• Molecular weight: 53468.34 Da
• Isoelectric Point: 5.6177

>NTDB_id=640524 LXF01_RS01095 WP_267967499.1 234153..235580(-) (pilR) [Acinetobacter sp. SH20PTE14]
MDSQPLVLLVDDEEDLCMLMQMSLSRMGVKTHVAHRLDEAKKALSTYSYDACLTDLNLPDGNGLQLLDWMNEHCPALPVA
VLTAYGNMDIAIAALKAGAFDFVSKPINPKHLEQLLQKALNKPLDEDITSQDALEHKMLIGESLPIQQLRRTLKKIARSQ
APVFITGESGTGKEVVANLVHRLSNRNEGPFIAINCGAIPTELMESELFGHKKGSFSGATQDKQGLIQSAHGGSLFLDEI
AELPLAMQVKLLRAVQEKRIRPVGSDCEIDVDFRVISASHQDLEALVQQGRFRQDLFFRIHVMDLVLPALRERGEDILLL
AQHFIQKISHEWEIATKPLTERAKNFLLNQYYPGNVRELRNIIERAMTLCDDEQIDLQHLQSAPLRQPNTQFNSAPTTND
STQLAANSNEQSLIPRKLPEEGLELFLENIEKEVLMNALNLTHWNRTLAAKKLGMSFRSLRYRLKKFGLDTEDEE

Nucleotide

• Length: 1428 bp

>NTDB_id=640524 LXF01_RS01095 WP_267967499.1 234153..235580(-) (pilR) [Acinetobacter sp. SH20PTE14]
GTGGATTCACAACCACTGGTATTGTTAGTTGATGACGAAGAAGACTTATGTATGCTGATGCAAATGTCTTTATCAAGGAT
GGGGGTTAAAACGCATGTTGCACATCGCCTCGACGAAGCTAAAAAAGCCTTGTCTACCTATAGCTACGATGCCTGTCTAA
CCGATCTCAACTTACCCGATGGTAATGGTCTACAGCTCTTAGATTGGATGAATGAACACTGTCCTGCCCTGCCCGTTGCT
GTGCTCACAGCCTATGGCAACATGGATATTGCCATTGCCGCATTAAAGGCGGGAGCTTTCGACTTTGTCAGCAAACCGAT
CAATCCGAAACATCTTGAACAACTGCTACAAAAAGCCCTGAATAAGCCTTTGGACGAAGACATTACTTCGCAAGATGCTT
TAGAACATAAAATGTTGATTGGTGAATCGCTTCCAATCCAGCAATTGCGTCGAACTCTAAAGAAAATTGCACGTTCACAA
GCACCAGTTTTTATTACGGGTGAATCTGGTACGGGTAAAGAAGTCGTGGCCAATCTGGTTCACCGTTTAAGCAACCGTAA
TGAAGGGCCATTTATTGCTATTAACTGTGGAGCAATTCCCACAGAGTTAATGGAAAGTGAACTTTTTGGCCATAAAAAAG
GCAGCTTTAGTGGTGCCACCCAAGACAAGCAAGGTCTGATTCAATCTGCACATGGCGGTAGCTTATTTCTGGACGAAATT
GCCGAATTACCTTTAGCCATGCAAGTTAAACTGCTACGTGCTGTACAGGAAAAACGTATTCGCCCCGTAGGTTCAGACTG
TGAAATTGATGTTGATTTCCGTGTGATCAGTGCCAGTCATCAGGACTTAGAAGCTCTCGTCCAACAAGGTCGATTCCGCC
AAGATTTATTTTTCCGTATCCATGTGATGGATTTAGTGTTGCCTGCCTTACGTGAACGTGGCGAAGATATCCTCTTATTG
GCGCAACATTTTATTCAAAAAATTAGCCATGAATGGGAAATTGCCACTAAGCCTCTGACTGAACGAGCGAAAAACTTCCT
ACTCAACCAATATTATCCGGGTAATGTCCGTGAACTCCGCAATATTATCGAACGTGCCATGACCCTCTGCGATGATGAGC
AAATTGATCTTCAACATCTGCAAAGTGCGCCATTAAGACAACCGAATACTCAGTTCAATTCCGCTCCAACAACGAATGAT
TCTACTCAGCTTGCTGCAAACAGCAACGAACAGAGTTTGATCCCTCGCAAACTACCTGAAGAAGGTTTAGAACTCTTTTT
AGAAAATATCGAAAAAGAAGTACTCATGAATGCGTTGAATTTGACTCACTGGAACAGAACACTTGCCGCCAAAAAATTAG
GTATGTCATTCCGTTCATTACGCTATCGTTTGAAAAAATTCGGCTTAGATACCGAAGACGAAGAGTAA

Domains

Predicted by InterproScan.

• Bacterial regulatory protein, Fis family (HTH_8) (426-467)

• Response regulator receiver domain (Response_reg) (7-116)

• Sigma-54 interaction domain (Sigma54_activat) (139-305)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilR	Acinetobacter baumannii strain A118	73.895	100	0.739
pilR	Pseudomonas aeruginosa PAK	49.145	98.526	0.484